C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002G1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162604-ENSG00000132849 CGP 9606 1:61681046-62163920
GeneTranscriptPositionBiotype
ENSG00000162604 (TM2D1)
TM2 domain containing 1 		ENST00000294613 (TM2D1-201) 61681047-61725423 protein_coding
ENST00000371177 (TM2D1-007) 61697509-61725133 protein_coding
ENST00000371178 (TM2D1-008) 61694154-61725120 retained_intron
ENST00000371180 (TM2D1-001) 61681049-61725423 protein_coding
ENST00000468586 (TM2D1-005) 61683497-61725067 nonsense_mediated_decay
ENST00000472357 (TM2D1-010) 61681048-61683857 retained_intron
ENST00000472989 (TM2D1-011) 61683272-61709418 processed_transcript
ENST00000488206 (TM2D1-003) 61681245-61725113 nonsense_mediated_decay
ENST00000488410 (TM2D1-006) 61683452-61696241 processed_transcript
ENST00000494926 (TM2D1-004) 61694697-61725050 nonsense_mediated_decay
ENST00000496465 (TM2D1-002) 61694698-61725144 nonsense_mediated_decay
ENST00000606498 (TM2D1-012) 61681046-61725141 protein_coding
ENSG00000236646 (LAMTOR5P1)
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 pseudogene 1 		ENST00000444290 (LAMTOR5P1-001) 62038842-62039111 processed_pseudogene
ENSG00000242860 (RN7SL180P)
RNA, 7SL, cytoplasmic 180, pseudogene 		ENST00000466769 (RN7SL180P-201) 62072448-62072741 misc_RNA
ENSG00000271200 (RP11-430G17.3)
 ENST00000605725 (RP11-430G17.3-001) 61741998-61742424 lincRNA
CIL_0002G1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028563-ENSMUSG00000061859 CGP 10090 4:98355370-98719603
GeneTranscriptPositionBiotype
ENSMUSG00000028563 (Tm2d1)
TM2 domain containing 1 		ENSMUST00000030292 (Tm2d1-002) 98355370-98383246 protein_coding
ENSMUST00000102793 (Tm2d1-001) 98355370-98383306 protein_coding
ENSMUST00000107051 (Tm2d1-003) 98355370-98383060 protein_coding
ENSMUST00000125034 (Tm2d1-005) 98355370-98375028 nonsense_mediated_decay
ENSMUST00000143116 (Tm2d1-004) 98355605-98383232 protein_coding
ENSMUSG00000081046 (Gm12846)
predicted gene 12846 		ENSMUST00000120431 (Gm12846-001) 98664366-98666137 processed_pseudogene
ENSMUSG00000093135 (Gm25997)
predicted gene, 25997 		ENSMUST00000175394 (Gm25997-201) 98359194-98359303 miRNA
ENSMUSG00000094456 (Gm22625)
predicted gene, 22625 		ENSMUST00000175382 (Gm22625-201) 98557740-98557865 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002G1_0001ENSG00000162604ENST00000294613ENST00000371177ENST00000371178ENST00000371180ENST00000468586ENST00000472357ENST00000472989ENST00000488206ENST00000488410ENST00000494926ENST00000496465ENST00000606498ENSG00000236646ENST00000444290ENSG00000242860ENST00000466769ENSG00000271200ENST00000605725CIL_0002G1_0002ENSMUSG00000028563ENSMUST00000030292ENSMUST00000102793ENSMUST00000107051ENSMUST00000125034ENSMUST00000143116ENSMUSG00000081046ENSMUST00000120431ENSMUSG00000093135ENSMUST00000175394ENSMUSG00000094456ENSMUST00000175382
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002G1_0001ENSG00000162604ENST00000294613ENST00000371177ENST00000468586ENST00000472989ENST00000488206ENST00000488410ENST00000494926ENST00000496465ENST00000606498ENSG00000236646ENST00000444290ENSG00000242860ENST00000466769ENSG00000271200ENST00000605725CIL_0002G1_0002ENSMUSG00000028563ENSMUST00000030292ENSMUST00000102793ENSMUST00000107051ENSMUST00000143116ENSMUSG00000081046ENSMUST00000120431ENSMUSG00000093135ENSMUST00000175394ENSMUSG00000094456ENSMUST00000175382
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162604 ENST00000294613 1.010±0.00 7.752±0.00 1.699±0.00 8.507±2.76 7.969±0.00 5.614±0.00 4.113±1.17 5.814±2.01 2.931±0.03 7.194±0.36 2.882±0.00 8.940±1.52 9.326±0.67 7.660±3.34
ENST00000371177 0.331±0.00 2.191±0.00 N/A N/A 1.209±0.00 1.388±0.00 0.644±0.00 0.578±0.00 N/A N/A 0.090±0.00 1.113±0.08 N/A 1.196±0.00
ENST00000371178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468586 N/A N/A N/A N/A N/A N/A N/A 1.972±0.00 3.692±0.00 N/A N/A N/A 6.235±0.00 N/A
ENST00000472357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472989 N/A N/A 2.588±0.00 13.937±0.00 4.468±0.00 2.094±0.00 N/A N/A 8.277±0.00 N/A 3.216±0.00 N/A N/A N/A
ENST00000488206 N/A N/A N/A 5.041±0.00 N/A 2.495±0.00 3.158±0.00 N/A N/A N/A 3.855±0.00 11.924±0.00 N/A 5.410±0.00
ENST00000488410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.171±0.00 N/A N/A N/A
ENST00000494926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.488±0.00
ENST00000496465 N/A N/A N/A 18.454±0.00 N/A N/A 8.742±0.00 N/A N/A N/A N/A N/A 7.406±0.00 N/A
ENST00000606498 2.033±0.00 N/A N/A 6.548±0.00 N/A 2.359±0.00 N/A 5.122±0.00 1.829±0.00 N/A 1.041±0.00 7.044±0.00 5.760±0.00 7.675±1.31
ENSG00000236646 ENST00000444290 N/A N/A 10.227±0.00 N/A 3.058±0.00 5.042±0.00 N/A 0.809±0.00 N/A N/A N/A 2.280±1.43 N/A N/A
ENSG00000242860 ENST00000466769 0.244±0.00 0.855±0.00 5.507±0.00 0.215±0.00 1.116±0.27 0.164±0.10 0.125±0.00 1.085±0.35 2.060±1.69 0.270±0.00 N/A 0.236±0.10 N/A 0.184±0.05
ENSG00000271200 ENST00000605725 0.068±0.00 0.140±0.00 N/A 0.774±0.00 0.304±0.00 N/A 1.138±0.00 0.996±0.00 0.137±0.00 0.776±0.00 0.507±0.25 0.720±0.57 0.286±0.00 0.393±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028563 ENSMUST00000030292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.877±0.00
ENSMUST00000102793 13.566±1.49 50.511±38.72 20.318±3.91 17.488±11.48 8.560±2.30 7.903±6.71 14.519±0.19 22.379±5.67 11.860±3.01 17.700±6.72 18.203±1.19 16.810±13.57 12.998±9.82 5.661±2.75
ENSMUST00000107051 N/A N/A N/A 4.494±0.00 N/A N/A N/A N/A N/A N/A N/A 7.624±2.73 3.700±1.00 N/A
ENSMUST00000125034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143116 17.344±0.00 N/A N/A 11.932±0.00 4.716±1.04 N/A N/A 10.160±0.60 5.373±2.88 6.912±0.00 N/A 13.815±3.16 13.970±4.24 2.008±0.02
ENSMUSG00000081046 ENSMUST00000120431 0.027±0.00 N/A 0.022±0.02 0.083±0.07 0.173±0.13 0.106±0.07 N/A 0.071±0.02 0.045±0.03 0.089±0.07 N/A 0.021±0.00 0.120±0.09 0.037±0.01
ENSMUSG00000093135 ENSMUST00000175394 N/A N/A N/A N/A 1664.250±0.00 N/A N/A N/A N/A 1042.630±0.00 25.180±0.00 16.164±0.00 N/A N/A
ENSMUSG00000094456 ENSMUST00000175382 N/A N/A N/A 151.932±0.00 N/A N/A N/A N/A 70.852±0.00 N/A N/A N/A N/A N/A

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