C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterochromatin protein 1, binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030541 Hp1bp3-201 ENSMUSG00000028759 10090 + 4:138216627-138243170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030541
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030541 28.227±5.72 37.122±6.29 41.720±1.01 39.556±1.45 29.951±2.44 22.726±2.70 15.810±2.61 29.255±3.46 16.815±3.23 39.829±4.78 10.852±1.49 35.967±3.47 13.293±4.46 4.961±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312239 HP1BP3-001 protein_coding Homo_sapiens 0 2156
ENST00000375000 HP1BP3-003 protein_coding Homo_sapiens 0 549
ENST00000375003 HP1BP3-004 protein_coding Homo_sapiens 0 1604
ENST00000414993 HP1BP3-010 protein_coding Homo_sapiens 0 414
ENST00000417710 HP1BP3-014 protein_coding Homo_sapiens 0 590
ENST00000419948 HP1BP3-015 protein_coding Homo_sapiens 0 608
ENST00000424732 HP1BP3-006 protein_coding Homo_sapiens 0 1031
ENST00000437575 HP1BP3-012 protein_coding Homo_sapiens 0 460
ENST00000438032 HP1BP3-005 protein_coding Homo_sapiens 0 1341
ENST00000487117 HP1BP3-007 processed_transcript Homo_sapiens 0 547
ENST00000491748 HP1BP3-008 processed_transcript Homo_sapiens 0 429

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