C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterochromatin protein 1, binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097836 Hp1bp3-202 ENSMUSG00000028759 10090 + 4:138216627-138243170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097836
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097836 8.665±0.00 12.652±1.21 41.428±6.17 7.888±1.49 6.000±0.71 7.720±2.59 6.940±0.82 6.160±1.36 10.697±0.72 8.049±1.87 37.784±12.38 17.003±10.27 2.258±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312239 HP1BP3-001 protein_coding Homo_sapiens 0 1906
ENST00000375003 HP1BP3-004 protein_coding Homo_sapiens 0 1604
ENST00000419948 HP1BP3-015 protein_coding Homo_sapiens 0 608
ENST00000424732 HP1BP3-006 protein_coding Homo_sapiens 0 1070
ENST00000438032 HP1BP3-005 protein_coding Homo_sapiens 0 1081
ENST00000491748 HP1BP3-008 processed_transcript Homo_sapiens 0 429

Loading