C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterochromatin protein 1, binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154581 Hp1bp3-011 ENSMUSG00000028759 10090 + 4:138217268-138229744 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000154581
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000154581 8.528±2.75 8.166±0.00 9.498±1.14 7.190±1.20 6.046±0.00 3.543±0.39 5.959±1.47 11.229±0.77 10.761±0.89 4.667±0.64 2.037±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312239 HP1BP3-001 protein_coding Homo_sapiens 0 780
ENST00000346991 CASC5-002 protein_coding Homo_sapiens 0.00005 57
ENST00000375000 HP1BP3-003 protein_coding Homo_sapiens 0 523
ENST00000375003 HP1BP3-004 protein_coding Homo_sapiens 0 230
ENST00000414993 HP1BP3-010 protein_coding Homo_sapiens 0 387
ENST00000417710 HP1BP3-014 protein_coding Homo_sapiens 0 558
ENST00000419948 HP1BP3-015 protein_coding Homo_sapiens 0 244
ENST00000424732 HP1BP3-006 protein_coding Homo_sapiens 0 531
ENST00000437575 HP1BP3-012 protein_coding Homo_sapiens 0 436
ENST00000438032 HP1BP3-005 protein_coding Homo_sapiens 0 750
ENST00000487117 HP1BP3-007 processed_transcript Homo_sapiens 0 520
ENST00000610026 PPA1-005 retained_intron Homo_sapiens 0.00002 57

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