C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family B (MDR/TAP), member 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028973 Abcb8 10090 + 5:24393663-24410054 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073076 Abcb8-201 24394155-24409945 protein_coding
  ENSMUST00000115074 Abcb8-002 24394396-24403977 protein_coding
  ENSMUST00000115077 Abcb8-001 24393676-24410054 protein_coding
  ENSMUST00000127816 Abcb8-007 24402254-24406711 retained_intron
  ENSMUST00000136414 Abcb8-006 24394408-24400665 retained_intron
  ENSMUST00000136459 Abcb8-003 24405815-24409946 retained_intron
  ENSMUST00000138168 Abcb8-005 24393663-24400222 protein_coding
  ENSMUST00000151535 Abcb8-004 24406408-24409924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073076ENSMUST00000115074ENSMUST00000115077ENSMUST00000136459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073076 21.941±2.73 32.960±5.05 9.013±1.01 12.441±4.26 26.641±10.50 29.675±5.49 33.601±3.96 32.716±2.55 14.354±2.39 9.107±1.20 14.272±1.24 20.491±7.44 15.228±6.07 9.034±3.89
ENSMUST00000115074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.547±0.00 5.146±0.69 2.234±0.00
ENSMUST00000115077 N/A N/A N/A 1.432±0.00 2.622±0.00 N/A N/A N/A N/A N/A 2.790±0.53 2.379±0.00 N/A N/A
ENSMUST00000136459 N/A N/A 1.932±0.00 3.427±0.79 4.366±0.00 N/A N/A N/A N/A N/A N/A 3.599±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0004O6 CIL_0004O6_0002 CGP 5:24384181-24410054
CIL_0004O7 CIL_0004O7_0002 CGP 5:24393663-24417834

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IBA integral component of membrane
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IBA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056672 abcb8 ATP-binding cassette, sub-family B (MDR/TAP), member 8 protein_coding Danio_rerio
ENSG00000197150 ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8 protein_coding Homo_sapiens

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