C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family B (MDR/TAP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136459 Abcb8-003 ENSMUSG00000028973 10090 + 5:24405815-24409946 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastOvaryENSMUST00000136459
Transcript ID Bladder Brain Breast Ovary
ENSMUST00000136459 1.932±0.00 3.427±0.79 4.366±0.00 3.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0004O6 CIL_0004O6_0002 CGP 5:24384181-24410054
CIL_0004O7 CIL_0004O7_0002 CGP 5:24393663-24417834

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297504 ABCB8-003 protein_coding Homo_sapiens 0 536
ENST00000358849 ABCB8-005 protein_coding Homo_sapiens 0 536
ENST00000466514 ABCB8-007 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000482309 ABCB8-006 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000482899 ABCB8-011 retained_intron Homo_sapiens 0 536
ENST00000498578 ABCB8-008 protein_coding Homo_sapiens 0 385
ENST00000542328 ABCB8-201 protein_coding Homo_sapiens 0 536

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