C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073076 Abcb8-201 ENSMUSG00000028973 10090 + 5:24394155-24409945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073076
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073076 21.941±2.73 32.960±5.05 9.013±1.01 12.441±4.26 26.641±10.50 29.675±5.49 33.601±3.96 32.716±2.55 14.354±2.39 9.107±1.20 14.272±1.24 20.491±7.44 15.228±6.07 9.034±3.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0004O6 CIL_0004O6_0002 CGP 5:24384181-24410054
CIL_0004O7 CIL_0004O7_0002 CGP 5:24393663-24417834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IBA integral component of membrane
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IBA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297504 ABCB8-003 protein_coding Homo_sapiens 0 1936
ENST00000358849 ABCB8-005 protein_coding Homo_sapiens 0 2039
ENST00000466514 ABCB8-007 nonsense_mediated_decay Homo_sapiens 0 1605
ENST00000470645 ABCB8-004 nonsense_mediated_decay Homo_sapiens 0 424
ENST00000477092 ABCB8-010 protein_coding Homo_sapiens 0 1133
ENST00000477719 ABCB8-009 protein_coding Homo_sapiens 0 1138
ENST00000482309 ABCB8-006 nonsense_mediated_decay Homo_sapiens 0 1746
ENST00000482899 ABCB8-011 retained_intron Homo_sapiens 0 833
ENST00000491920 ABCB8-023 protein_coding Homo_sapiens 0 451
ENST00000498578 ABCB8-008 protein_coding Homo_sapiens 0 1860
ENST00000542328 ABCB8-201 protein_coding Homo_sapiens 0 1751

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