C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member f
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186469 Rhof-201 ENSMUSG00000029449 10090 - 5:123103044-123132396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186469
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186469 2.488±0.00 1.613±0.00 0.389±0.08 3.510±0.70 0.522±0.16 0.755±0.13 0.728±0.59 0.878±0.06 0.490±0.11 0.600±0.12 0.481±0.27 0.031±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692
CIL_00006S CIL_00006S_0003 CGP 5:123103044-123167435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007015 IEA actin filament organization
GO:0007264 IEA small GTPase mediated signal transduction
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267205 RHOF-001 protein_coding Homo_sapiens 0 776
ENST00000449592 TMEM120B-002 protein_coding Homo_sapiens 2.00386e-43 183
ENST00000535560 RHOF-003 protein_coding Homo_sapiens 0 418
ENST00000537171 RHOF-002 protein_coding Homo_sapiens 0 597
ENST00000537265 RHOF-004 protein_coding Homo_sapiens 0 621
ENST00000538055 TMEM120B-004 processed_transcript Homo_sapiens 4e-20 104
ENST00000541657 RHOF-006 protein_coding Homo_sapiens 0 333
ENST00000545544 RHOF-005 processed_transcript Homo_sapiens 5e-25 119
ENST00000546227 RHOF-007 protein_coding Homo_sapiens 0 494

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