C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ras homolog gene family, member f
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160479 Rhof-003 ENSMUSG00000029449 10090 - 5:123103044-123132461 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartTestisENSMUST00000160479
Transcript ID Adrenal Heart Testis
ENSMUST00000160479 1.331±0.00 0.295±0.00 0.111±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692
CIL_00006S CIL_00006S_0003 CGP 5:123103044-123167435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267205 RHOF-001 protein_coding Homo_sapiens 0 780
ENST00000449592 TMEM120B-002 protein_coding Homo_sapiens 2.00386e-43 183
ENST00000535560 RHOF-003 protein_coding Homo_sapiens 0 422
ENST00000537171 RHOF-002 protein_coding Homo_sapiens 0 601
ENST00000537265 RHOF-004 protein_coding Homo_sapiens 0 621
ENST00000538055 TMEM120B-004 processed_transcript Homo_sapiens 4e-20 104
ENST00000541657 RHOF-006 protein_coding Homo_sapiens 0 333
ENST00000545544 RHOF-005 processed_transcript Homo_sapiens 5e-25 119
ENST00000546227 RHOF-007 protein_coding Homo_sapiens 0 494

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