C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member f
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031401 Rhof-001 ENSMUSG00000029449 10090 - 5:123118178-123132692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031401
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031401 0.502±0.00 9.278±0.00 11.866±3.13 19.947±1.57 4.391±0.31 0.534±0.41 3.842±0.24 0.900±0.00 1.743±0.49 1.491±0.93 0.350±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692
CIL_00006S CIL_00006S_0003 CGP 5:123103044-123167435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267205 RHOF-001 protein_coding Homo_sapiens 0 780
ENST00000449592 TMEM120B-002 protein_coding Homo_sapiens 2.00386e-43 183
ENST00000535560 RHOF-003 protein_coding Homo_sapiens 0 422
ENST00000537171 RHOF-002 protein_coding Homo_sapiens 0 601
ENST00000537265 RHOF-004 protein_coding Homo_sapiens 0 621
ENST00000538055 TMEM120B-004 processed_transcript Homo_sapiens 4e-20 104
ENST00000541657 RHOF-006 protein_coding Homo_sapiens 0 333
ENST00000545544 RHOF-005 processed_transcript Homo_sapiens 5e-25 119
ENST00000546227 RHOF-007 protein_coding Homo_sapiens 0 494

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