C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucocorticoid induced transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029638 Glcci1 10090 + 6:8509600-8597548 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064285 Glcci1-001 8509600-8597548 protein_coding
  ENSMUST00000161217 Glcci1-007 8520058-8593512 protein_coding
  ENSMUST00000161494 Glcci1-012 8537816-8594071 protein_coding
  ENSMUST00000162206 Glcci1-010 8579705-8591630 processed_transcript
  ENSMUST00000162383 Glcci1-009 8511227-8579647 protein_coding
  ENSMUST00000162567 Glcci1-006 8520020-8593621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064285ENSMUST00000161217ENSMUST00000161494ENSMUST00000162567
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064285 1.213±0.00 1.410±0.25 4.730±0.29 2.051±0.99 3.980±0.62 0.671±0.12 1.139±0.10 1.147±0.44 3.005±0.00 0.507±0.14 3.547±1.22 0.649±0.28 4.153±0.68
ENSMUST00000161217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.817±12.59
ENSMUST00000161494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.382±0.00 N/A N/A
ENSMUST00000162567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.908±2.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V7 CIL_0002V7_0002 CGP 6:8255936-8597480
CIL_0002V6 CIL_0002V6_0002 CGP 6:8259288-8597548
CIL_0002EL CIL_0002EL_0002 CGP 6:8509600-8778488

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008503 glcci1 glucocorticoid induced transcript 1 protein_coding Danio_rerio
ENSG00000106415 GLCCI1 glucocorticoid induced transcript 1 protein_coding Homo_sapiens

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