C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucocorticoid induced transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064285 Glcci1-001 ENSMUSG00000029638 10090 + 6:8509600-8597548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064285
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064285 1.213±0.00 1.410±0.25 4.730±0.29 2.051±0.99 3.980±0.62 0.671±0.12 1.139±0.10 1.147±0.44 3.005±0.00 0.507±0.14 3.547±1.22 0.649±0.28 4.153±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V7 CIL_0002V7_0002 CGP 6:8255936-8597480
CIL_0002V6 CIL_0002V6_0002 CGP 6:8259288-8597548
CIL_0002EL CIL_0002EL_0002 CGP 6:8509600-8778488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223145 GLCCI1-001 protein_coding Homo_sapiens 0 3192
ENST00000414914 GLCCI1-008 protein_coding Homo_sapiens 0 385
ENST00000430798 GLCCI1-009 protein_coding Homo_sapiens 0 608
ENST00000438949 GLCCI1-010 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000460897 GLCCI1-006 retained_intron Homo_sapiens 0 315
ENST00000468567 RPA3OS-005 processed_transcript Homo_sapiens 0 209
ENST00000469183 RPA3OS-002 processed_transcript Homo_sapiens 0 202
ENST00000470583 GLCCI1-004 processed_transcript Homo_sapiens 0 621
ENST00000474269 GLCCI1-005 processed_transcript Homo_sapiens 0 377
ENST00000482540 GLCCI1-002 retained_intron Homo_sapiens 0 1570
ENST00000489405 GLCCI1-003 retained_intron Homo_sapiens 0 957
ENST00000491947 GLCCI1-012 retained_intron Homo_sapiens 0 305
ENST00000492797 GLCCI1-007 retained_intron Homo_sapiens 0 462
ENST00000496617 GLCCI1-011 processed_transcript Homo_sapiens 0 488

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