C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002EL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106415-ENSG00000003147 CGP 9606 7:7968794-8262687
GeneTranscriptPositionBiotype
ENSG00000003147 (ICA1)
islet cell autoantigen 1, 69kDa 		ENST00000265577 (ICA1-002) 8113255-8262206 protein_coding
ENST00000317367 (ICA1-008) 8157116-8236894 protein_coding
ENST00000339809 (ICA1-004) 8113772-8262527 nonsense_mediated_decay
ENST00000396675 (ICA1-007) 8113309-8262052 protein_coding
ENST00000401396 (ICA1-006) 8113779-8236894 protein_coding
ENST00000402384 (ICA1-001) 8113184-8262281 protein_coding
ENST00000406470 (ICA1-201) 8113187-8262612 protein_coding
ENST00000407906 (ICA1-003) 8156557-8262612 protein_coding
ENST00000422063 (ICA1-202) 8113923-8235926 protein_coding
ENST00000430867 (ICA1-009) 8218479-8262069 protein_coding
ENST00000446305 (ICA1-012) 8228642-8262687 protein_coding
ENST00000447326 (ICA1-011) 8218398-8262543 protein_coding
ENST00000455539 (ICA1-005) 8113772-8262153 nonsense_mediated_decay
ENST00000457755 (ICA1-014) 8221353-8262170 nonsense_mediated_decay
ENST00000470696 (ICA1-013) 8141765-8157764 retained_intron
ENST00000476942 (ICA1-015) 8218441-8218951 processed_transcript
ENST00000486677 (ICA1-010) 8127873-8262145 processed_transcript
ENST00000490041 (ICA1-016) 8158331-8218459 retained_intron
ENSG00000106415 (GLCCI1)
glucocorticoid induced transcript 1 		ENST00000223145 (GLCCI1-001) 7968794-8089080 protein_coding
ENST00000414914 (GLCCI1-008) 7969687-8070955 protein_coding
ENST00000430798 (GLCCI1-009) 7969687-8071010 protein_coding
ENST00000438949 (GLCCI1-010) 8055507-8094272 nonsense_mediated_decay
ENST00000460897 (GLCCI1-006) 7969736-8004247 retained_intron
ENST00000470583 (GLCCI1-004) 7970441-8060232 processed_transcript
ENST00000474269 (GLCCI1-005) 7970452-8070948 processed_transcript
ENST00000482540 (GLCCI1-002) 8070075-8089077 retained_intron
ENST00000489405 (GLCCI1-003) 8003897-8086939 retained_intron
ENST00000491947 (GLCCI1-012) 8084639-8086240 retained_intron
ENST00000492797 (GLCCI1-007) 7969707-8022724 retained_intron
ENST00000496617 (GLCCI1-011) 8055732-8078742 processed_transcript
ENSG00000219545 (RPA3OS)
UBAP1-MVB12-associated (UMA) domain containing 1 		ENST00000406829 (RPA3OS-001) 7772361-7879223 protein_coding
ENST00000463725 (RPA3OS-003) 7640752-7877443 processed_transcript
ENST00000468567 (RPA3OS-005) 7640763-8004059 processed_transcript
ENST00000469183 (RPA3OS-002) 7640752-8004053 processed_transcript
ENST00000471760 (RPA3OS-006) 7640784-7692508 processed_transcript
ENST00000482067 (RPA3OS-007) 7640794-7968020 processed_transcript
ENST00000493246 (RPA3OS-004) 7640711-7738822 processed_transcript
ENSG00000233264 (AC006042.8)
 ENST00000454684 (AC006042.8-001) 7980312-7982228 processed_pseudogene
ENSG00000265212 (AC007009.2)
 ENST00000577980 (AC007009.2-201) 8154916-8155027 miRNA
CIL_0002EL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029638-ENSMUSG00000062995 CGP 10090 6:8509600-8778488
GeneTranscriptPositionBiotype
ENSMUSG00000029638 (Glcci1)
glucocorticoid induced transcript 1 		ENSMUST00000064285 (Glcci1-001) 8509600-8597548 protein_coding
ENSMUST00000161217 (Glcci1-007) 8520058-8593512 protein_coding
ENSMUST00000161494 (Glcci1-012) 8537816-8594071 protein_coding
ENSMUST00000162206 (Glcci1-010) 8579705-8591630 processed_transcript
ENSMUST00000162383 (Glcci1-009) 8511227-8579647 protein_coding
ENSMUST00000162567 (Glcci1-006) 8520020-8593621 protein_coding
ENSMUSG00000062995 (Ica1)
islet cell autoantigen 1 		ENSMUST00000038403 (Ica1-001) 8630527-8778484 protein_coding
ENSMUST00000115518 (Ica1-002) 8659001-8778487 protein_coding
ENSMUST00000115519 (Ica1-006) 8630527-8778154 protein_coding
ENSMUST00000115520 (Ica1-004) 8630527-8778439 protein_coding
ENSMUST00000126039 (Ica1-009) 8749729-8770540 protein_coding
ENSMUST00000126430 (Ica1-010) 8659002-8737097 protein_coding
ENSMUST00000127398 (Ica1-011) 8658991-8672317 protein_coding
ENSMUST00000135113 (Ica1-003) 8730440-8778488 processed_transcript
ENSMUST00000145870 (Ica1-012) 8630699-8647819 processed_transcript
ENSMUST00000151758 (Ica1-008) 8754634-8778123 protein_coding
ENSMUST00000153390 (Ica1-005) 8658284-8778154 protein_coding
ENSMUST00000156695 (Ica1-007) 8630527-8758399 nonsense_mediated_decay
ENSMUSG00000089862 (Gm16039)
predicted gene 16039 		ENSMUST00000159168 (Gm16039-005) 8270466-8428767 protein_coding
ENSMUST00000159335 (Gm16039-001) 8259288-8459470 protein_coding
ENSMUST00000159378 (Gm16039-007) 8259350-8427138 protein_coding
ENSMUST00000159433 (Gm16039-002) 8259430-8428760 protein_coding
ENSMUST00000160253 (Gm16039-003) 8419678-8428238 processed_transcript
ENSMUST00000160705 (Gm16039-008) 8259428-8427279 protein_coding
ENSMUST00000161400 (Gm16039-006) 8259444-8279552 processed_transcript
ENSMUST00000162034 (Gm16039-009) 8259382-8428764 protein_coding
ENSMUST00000162564 (Gm16039-004) 8259450-8597480 nonsense_mediated_decay
ENSMUSG00000090234 (Gm16042)
predicted gene 16042 		ENSMUST00000161905 (Gm16042-001) 8595743-8596989 transcribed_processed_pseudogene
ENSMUSG00000090407 (Gm16042)
predicted gene 16042 		ENSMUST00000169578 (Gm16042-001) 8595738-8596988 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EL_0001ENSG00000003147ENST00000265577ENST00000317367ENST00000339809ENST00000396675ENST00000401396ENST00000402384ENST00000406470ENST00000407906ENST00000422063ENST00000455539ENST00000470696ENST00000486677ENST00000490041ENSG00000106415ENST00000223145ENST00000482540ENST00000489405ENST00000496617ENSG00000219545ENST00000406829ENST00000469183ENSG00000233264ENST00000454684ENSG00000265212ENST00000577980CIL_0002EL_0002ENSMUSG00000029638ENSMUST00000064285ENSMUST00000161217ENSMUST00000161494ENSMUST00000162567ENSMUSG00000062995ENSMUST00000038403ENSMUST00000115519ENSMUST00000115520ENSMUST00000126039ENSMUST00000126430ENSMUST00000145870ENSMUST00000153390ENSMUST00000156695ENSMUSG00000089862ENSMUST00000159168ENSMUST00000159378ENSMUST00000159433ENSMUST00000162034ENSMUST00000162564ENSMUSG00000090234ENSMUST00000161905ENSMUSG00000090407ENSMUST00000169578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003147 ENST00000265577 N/A 1.922±0.00 N/A 2.267±0.00 N/A N/A 1.583±0.25 N/A 0.881±0.00 N/A N/A 1.737±0.00 0.997±0.70 N/A
ENST00000317367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.424±0.00 N/A N/A N/A
ENST00000339809 N/A N/A N/A N/A 3.542±0.00 1.770±0.00 3.286±0.00 N/A 2.597±0.00 1.780±0.57 0.073±0.00 2.752±0.23 1.952±0.00 N/A
ENST00000396675 2.660±0.00 N/A N/A 6.148±0.00 2.223±0.00 1.558±0.00 3.041±0.00 5.220±0.00 2.838±0.00 1.372±0.00 N/A 8.880±6.74 0.999±0.22 N/A
ENST00000401396 4.182±0.00 N/A N/A N/A 3.512±0.00 N/A 4.374±0.00 0.698±0.00 2.438±0.00 1.173±0.00 N/A N/A 1.422±0.00 N/A
ENST00000402384 N/A N/A N/A N/A N/A 1.896±0.00 N/A N/A N/A N/A N/A N/A 0.876±0.40 N/A
ENST00000406470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.685±0.00 N/A N/A
ENST00000407906 N/A N/A N/A N/A 1.854±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422063 N/A N/A N/A N/A N/A 1.077±0.00 N/A 3.607±0.00 N/A 0.940±0.00 0.761±0.00 8.021±0.00 0.736±0.00 N/A
ENST00000430867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455539 3.387±0.00 3.403±0.00 2.044±0.00 3.978±0.00 2.606±0.48 1.536±0.79 2.194±0.53 2.971±0.00 1.005±0.53 1.311±0.00 N/A 4.944±0.00 N/A 7.287±0.00
ENST00000457755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00 15.344±0.00 N/A N/A
ENST00000476942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486677 23.368±0.00 18.440±0.00 N/A N/A 27.497±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.299±0.00
ENSG00000106415 ENST00000223145 N/A 1.960±0.00 N/A 2.477±0.71 3.978±0.00 N/A 0.592±0.00 N/A 0.846±0.00 1.679±0.00 N/A 1.652±0.04 1.153±0.22 10.199±3.60
ENST00000414914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482540 N/A N/A 1.281±0.00 N/A 1.512±0.00 1.545±0.00 N/A 0.998±0.00 0.781±0.00 2.968±0.00 N/A 1.482±0.00 N/A N/A
ENST00000489405 N/A N/A N/A N/A N/A 4.012±0.00 N/A N/A N/A N/A 1.582±0.00 N/A N/A N/A
ENST00000491947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.711±0.00 N/A N/A N/A
ENSG00000219545 ENST00000406829 2.279±0.00 3.163±0.00 2.077±0.00 N/A 4.095±0.00 2.546±0.00 2.861±0.00 6.405±0.00 2.562±1.00 3.336±0.00 0.569±0.00 4.240±0.84 3.131±0.82 3.520±0.00
ENST00000463725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.355±0.00 N/A N/A
ENST00000471760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233264 ENST00000454684 0.115±0.00 0.385±0.00 0.462±0.00 0.217±0.15 0.158±0.00 0.587±0.00 0.018±0.00 N/A 0.599±0.00 0.906±0.77 N/A 0.134±0.07 0.446±0.40 0.479±0.40
ENSG00000265212 ENST00000577980 0.415±0.00 0.134±0.00 N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.663±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029638 ENSMUST00000064285 1.213±0.00 N/A 1.410±0.25 4.730±0.29 2.051±0.99 3.980±0.62 0.671±0.12 1.139±0.10 1.147±0.44 3.005±0.00 0.507±0.14 3.547±1.22 0.649±0.28 4.153±0.68
ENSMUST00000161217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.817±12.59
ENSMUST00000161494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.382±0.00 N/A N/A
ENSMUST00000162206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.908±2.39
ENSMUSG00000062995 ENSMUST00000038403 0.865±0.31 1.133±0.34 6.475±2.45 5.305±0.53 0.172±0.00 1.392±0.39 1.143±0.16 0.739±0.39 1.112±0.80 1.096±0.41 0.437±0.23 0.309±0.10 1.075±0.55 N/A
ENSMUST00000115518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115519 0.670±0.32 1.055±0.29 N/A N/A 0.468±0.17 N/A N/A 0.710±0.00 0.506±0.40 1.547±0.53 0.366±0.19 1.208±0.49 1.645±1.20 N/A
ENSMUST00000115520 N/A 0.865±0.22 N/A N/A 0.876±0.06 2.134±0.17 N/A N/A N/A 3.199±0.26 N/A 0.624±0.15 N/A N/A
ENSMUST00000126039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 99.650±0.00
ENSMUST00000126430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.776±0.00 N/A N/A
ENSMUST00000127398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145870 N/A 2.961±0.80 N/A N/A 0.922±0.10 3.193±0.25 N/A 1.343±0.44 0.308±0.14 N/A N/A 1.195±0.36 N/A N/A
ENSMUST00000151758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153390 0.800±0.00 N/A N/A N/A 0.825±0.12 N/A N/A N/A 0.206±0.00 N/A N/A 1.399±0.52 N/A N/A
ENSMUST00000156695 N/A 1.110±0.00 N/A N/A 0.466±0.00 N/A N/A N/A 0.205±0.14 N/A 0.252±0.05 0.340±0.00 N/A N/A
ENSMUSG00000089862 ENSMUST00000159168 6.762±0.41 8.589±2.12 N/A N/A 7.061±1.53 10.821±2.25 3.369±0.92 7.780±1.71 8.367±2.43 7.045±0.11 N/A 7.592±2.50 2.800±1.35 N/A
ENSMUST00000159335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.883±0.00 N/A
ENSMUST00000159433 4.384±0.24 N/A 6.626±0.46 9.267±0.13 3.653±0.00 6.247±0.00 3.407±0.68 7.032±2.39 7.319±3.16 7.395±0.00 4.904±0.18 7.835±1.87 6.583±0.22 N/A
ENSMUST00000160253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162034 N/A 4.587±0.00 N/A N/A N/A N/A N/A 2.887±0.00 3.445±0.89 N/A N/A N/A N/A N/A
ENSMUST00000162564 N/A N/A N/A 3.686±0.35 N/A N/A N/A N/A 1.482±0.05 N/A 0.519±0.11 2.194±0.00 0.735±0.00 N/A
ENSMUSG00000090234 ENSMUST00000161905 14.156±2.47 N/A 8.171±0.00 21.532±0.00 16.245±6.52 11.787±0.77 6.988±0.38 8.332±0.80 5.829±1.31 19.177±3.63 2.278±0.11 10.279±1.08 N/A 21.890±1.91
ENSMUSG00000090407 ENSMUST00000169578 6.983±0.00 7.761±0.54 7.198±0.00 22.717±3.86 8.760±0.00 9.865±0.15 6.183±0.00 8.213±0.51 7.432±0.00 19.721±0.00 N/A 8.672±0.45 3.586±0.32 N/A

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