C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucocorticoid induced transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106415 GLCCI1 9606 + 7:7968794-8094272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223145 GLCCI1-001 7968794-8089080 protein_coding
  ENST00000414914 GLCCI1-008 7969687-8070955 protein_coding
  ENST00000430798 GLCCI1-009 7969687-8071010 protein_coding
  ENST00000438949 GLCCI1-010 8055507-8094272 nonsense_mediated_decay
  ENST00000460897 GLCCI1-006 7969736-8004247 retained_intron
  ENST00000470583 GLCCI1-004 7970441-8060232 processed_transcript
  ENST00000474269 GLCCI1-005 7970452-8070948 processed_transcript
  ENST00000482540 GLCCI1-002 8070075-8089077 retained_intron
  ENST00000489405 GLCCI1-003 8003897-8086939 retained_intron
  ENST00000491947 GLCCI1-012 8084639-8086240 retained_intron
  ENST00000492797 GLCCI1-007 7969707-8022724 retained_intron
  ENST00000496617 GLCCI1-011 8055732-8078742 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223145ENST00000482540ENST00000489405ENST00000496617
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223145 1.960±0.00 N/A 2.477±0.71 3.978±0.00 N/A 0.592±0.00 N/A 0.846±0.00 1.679±0.00 N/A 1.652±0.04 1.153±0.22 10.199±3.60
ENST00000482540 N/A 1.281±0.00 N/A 1.512±0.00 1.545±0.00 N/A 0.998±0.00 0.781±0.00 2.968±0.00 N/A 1.482±0.00 N/A N/A
ENST00000489405 N/A N/A N/A N/A 4.012±0.00 N/A N/A N/A N/A 1.582±0.00 N/A N/A N/A
ENST00000496617 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.711±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V7 CIL_0002V7_0001 CGP 7:7636518-8004059
CIL_0002V6 CIL_0002V6_0001 CGP 7:7640711-8094272
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008503 glcci1 glucocorticoid induced transcript 1 protein_coding Danio_rerio
ENSMUSG00000029638 Glcci1 glucocorticoid induced transcript 1 protein_coding Mus_musculus

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