C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: centrosomal protein 41
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029790 Cep41 10090 - 6:30653457-30693749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031810 Cep41-001 30653457-30693749 protein_coding
  ENSMUST00000115130 Cep41-003 30679088-30693700 protein_coding
  ENSMUST00000115131 Cep41-002 30654378-30693695 protein_coding
  ENSMUST00000132763 Cep41-009 30654379-30669355 processed_transcript
  ENSMUST00000133373 Cep41-006 30666314-30680533 protein_coding
  ENSMUST00000140211 Cep41-004 30653459-30693693 nonsense_mediated_decay
  ENSMUST00000140252 Cep41-005 30660982-30693088 processed_transcript
  ENSMUST00000146951 Cep41-007 30658382-30661369 retained_intron
  ENSMUST00000153107 Cep41-008 30655532-30656809 processed_transcript
  ENSMUST00000169422 Cep41-010 30666028-30693676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031810ENSMUST00000115130ENSMUST00000132763ENSMUST00000133373ENSMUST00000140211ENSMUST00000146951ENSMUST00000153107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031810 0.760±0.05 0.101±0.00 1.430±0.46 3.246±2.08 0.410±0.00 0.329±0.17 0.430±0.11 0.481±0.14 1.486±0.83 1.417±0.00 0.135±0.07 1.287±0.34 1.051±0.44 9.201±3.05
ENSMUST00000115130 1.516±0.00 N/A N/A N/A 0.791±0.00 N/A 0.535±0.00 0.932±0.02 0.360±0.00 N/A N/A 2.242±0.93 N/A N/A
ENSMUST00000132763 N/A 0.291±0.00 N/A 0.725±0.00 N/A 0.253±0.08 N/A N/A N/A N/A N/A 0.946±0.10 N/A 5.780±0.86
ENSMUST00000133373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A N/A N/A
ENSMUST00000140211 N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A 0.056±0.00 0.412±0.13 N/A N/A
ENSMUST00000146951 N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A 0.216±0.00 1.812±0.00 N/A 17.216±0.00
ENSMUST00000153107 N/A 1.411±0.42 N/A N/A 0.411±0.00 1.047±0.30 N/A N/A 0.364±0.00 N/A 0.255±0.01 1.744±0.42 3.079±0.00 45.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_00026Z CIL_00026Z_0002 CGP 6:30639218-30693749
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0005929 IDA cilium
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0018095 ISS protein polyglutamylation
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038500 cep41 centrosomal protein 41 protein_coding Danio_rerio
ENSG00000106477 CEP41 centrosomal protein 41kDa protein_coding Homo_sapiens

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