C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031810 Cep41-001 ENSMUSG00000029790 10090 - 6:30653457-30693749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031810 0.760±0.05 0.101±0.00 1.430±0.46 3.246±2.08 0.410±0.00 0.329±0.17 0.430±0.11 0.481±0.14 1.486±0.83 1.417±0.00 0.135±0.07 1.287±0.34 1.051±0.44 9.201±3.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_00026Z CIL_00026Z_0002 CGP 6:30639218-30693749
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0005929 IDA cilium
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0018095 ISS protein polyglutamylation
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223208 CEP41-001 protein_coding Homo_sapiens 0 1325
ENST00000343969 CEP41-016 protein_coding Homo_sapiens 0 905
ENST00000471201 CEP41-007 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000472739 CEP41-010 protein_coding Homo_sapiens 0 568
ENST00000475282 CEP41-012 protein_coding Homo_sapiens 0 497
ENST00000477003 CEP41-005 protein_coding Homo_sapiens 0 590
ENST00000484549 CEP41-004 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000485736 CEP41-003 retained_intron Homo_sapiens 0 603
ENST00000492389 CEP41-011 protein_coding Homo_sapiens 0 660
ENST00000498527 CEP41-014 retained_intron Homo_sapiens 0 416
ENST00000541543 CEP41-201 protein_coding Homo_sapiens 0 1229
ENST00000603513 CEP41-017 retained_intron Homo_sapiens 0 237

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