C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140211 Cep41-004 ENSMUSG00000029790 10090 - 6:30653459-30693693 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleOvaryENSMUST00000140211
Transcript ID Colon Muscle Ovary
ENSMUST00000140211 0.299±0.00 0.056±0.00 0.412±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_00026Z CIL_00026Z_0002 CGP 6:30639218-30693749
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005929 IDA cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223208 CEP41-001 protein_coding Homo_sapiens 0 1229
ENST00000343969 CEP41-016 protein_coding Homo_sapiens 0 385
ENST00000471201 CEP41-007 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000472739 CEP41-010 protein_coding Homo_sapiens 0 250
ENST00000475282 CEP41-012 protein_coding Homo_sapiens 0 252
ENST00000477003 CEP41-005 protein_coding Homo_sapiens 0 316
ENST00000484549 CEP41-004 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000485736 CEP41-003 retained_intron Homo_sapiens 0 603
ENST00000492389 CEP41-011 protein_coding Homo_sapiens 0 252
ENST00000498527 CEP41-014 retained_intron Homo_sapiens 0 387
ENST00000541543 CEP41-201 protein_coding Homo_sapiens 0 1229
ENST00000603513 CEP41-017 retained_intron Homo_sapiens 0 237

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