C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153107 Cep41-008 ENSMUSG00000029790 10090 - 6:30655532-30656809 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000153107
Transcript ID Adrenal Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000153107 1.411±0.42 0.411±0.00 1.047±0.30 0.364±0.00 0.255±0.01 1.744±0.42 3.079±0.00 45.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_00026Z CIL_00026Z_0002 CGP 6:30639218-30693749
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223208 CEP41-001 protein_coding Homo_sapiens 0 353
ENST00000343969 CEP41-016 protein_coding Homo_sapiens 2e-24 117
ENST00000484549 CEP41-004 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000485736 CEP41-003 retained_intron Homo_sapiens 0 353
ENST00000541543 CEP41-201 protein_coding Homo_sapiens 1e-23 117
ENST00000603513 CEP41-017 retained_intron Homo_sapiens 0 244

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