C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114468 Osbpl3-003 ENSMUSG00000029822 10090 - 6:50293330-50382837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000114468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114468 0.997±0.00 2.622±0.09 5.185±1.89 0.317±0.00 0.607±0.12 1.202±0.39 4.003±1.52 0.044±0.01 1.435±0.37 1.023±0.40 0.531±0.06 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0002 CGP 6:50189369-50456201
CIL_0002CR CIL_0002CR_0002 CGP 6:50293330-50566538

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0015485 IEA cholesterol binding
GO:0016020 IEA membrane
GO:0031965 IEA nuclear membrane
GO:0097038 IEA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313367 OSBPL3-001 protein_coding Homo_sapiens 0 2276
ENST00000396429 OSBPL3-003 protein_coding Homo_sapiens 0 1434
ENST00000396431 OSBPL3-002 protein_coding Homo_sapiens 0 2942
ENST00000409069 OSBPL3-006 protein_coding Homo_sapiens 0 1434
ENST00000409452 OSBPL3-005 nonsense_mediated_decay Homo_sapiens 0 989
ENST00000409555 OSBPL3-008 nonsense_mediated_decay Homo_sapiens 0 1186
ENST00000409759 OSBPL3-007 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000409863 OSBPL3-004 nonsense_mediated_decay Homo_sapiens 0 1849
ENST00000415162 OSBPL3-009 protein_coding Homo_sapiens 0 453
ENST00000441059 OSBPL3-010 protein_coding Homo_sapiens 0 377
ENST00000461835 OSBPL3-013 retained_intron Homo_sapiens 1.00053e-42 176

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