C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071728 Osbpl3-001 ENSMUSG00000029822 10090 - 6:50296799-50456170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071728 1.902±1.53 3.030±0.37 9.977±2.40 0.606±0.18 1.237±0.35 3.059±0.90 1.676±0.04 4.044±0.35 0.340±0.08 1.594±0.71 0.168±0.11 1.642±0.54 4.314±1.14 0.151±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0002 CGP 6:50189369-50456201
CIL_0002CR CIL_0002CR_0002 CGP 6:50293330-50566538

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313367 OSBPL3-001 protein_coding Homo_sapiens 0 1613
ENST00000396429 OSBPL3-003 protein_coding Homo_sapiens 0 1716
ENST00000396431 OSBPL3-002 protein_coding Homo_sapiens 0 1602
ENST00000409069 OSBPL3-006 protein_coding Homo_sapiens 0 2619
ENST00000409452 OSBPL3-005 nonsense_mediated_decay Homo_sapiens 0 989
ENST00000409555 OSBPL3-008 nonsense_mediated_decay Homo_sapiens 0 1700
ENST00000409759 OSBPL3-007 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000409863 OSBPL3-004 nonsense_mediated_decay Homo_sapiens 0 1186
ENST00000415162 OSBPL3-009 protein_coding Homo_sapiens 0 453
ENST00000441059 OSBPL3-010 protein_coding Homo_sapiens 0 377

Loading