C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090019 Osbpl3-007 ENSMUSG00000029822 10090 - 6:50297065-50370215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090019
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090019 0.249±0.00 2.459±0.49 6.196±0.00 5.366±0.00 1.229±0.00 2.962±0.40 3.100±0.40 6.039±1.64 0.036±0.00 1.147±0.00 0.160±0.01 2.079±1.77 2.253±0.39 0.071±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CS CIL_0002CS_0002 CGP 6:50189369-50456201
CIL_0002CR CIL_0002CR_0002 CGP 6:50293330-50566538

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313367 OSBPL3-001 protein_coding Homo_sapiens 0 2887
ENST00000396429 OSBPL3-003 protein_coding Homo_sapiens 0 1430
ENST00000396431 OSBPL3-002 protein_coding Homo_sapiens 0 1862
ENST00000409069 OSBPL3-006 protein_coding Homo_sapiens 0 1430
ENST00000409452 OSBPL3-005 nonsense_mediated_decay Homo_sapiens 0 1971
ENST00000409555 OSBPL3-008 nonsense_mediated_decay Homo_sapiens 0 928
ENST00000409759 OSBPL3-007 nonsense_mediated_decay Homo_sapiens 0 1310
ENST00000409863 OSBPL3-004 nonsense_mediated_decay Homo_sapiens 0 946
ENST00000415162 OSBPL3-009 protein_coding Homo_sapiens 0 425
ENST00000441059 OSBPL3-010 protein_coding Homo_sapiens 0 350
ENST00000461835 OSBPL3-013 retained_intron Homo_sapiens 1.00053e-42 176

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