C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126773 Ergic2-012 ENSMUSG00000030304 10090 - 6:148181928-148196243 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverTestisENSMUST00000126773
Transcript ID Adipose Breast Colon Heart Kidney Liver Testis
ENSMUST00000126773 7.488±1.35 7.703±4.39 6.923±0.00 5.800±0.55 5.153±0.01 5.482±0.39 38.014±5.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0002 CGP 6:147475871-148182758
CIL_0006HR CIL_0006HR_0002 CGP 6:148047259-148212374

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360150 ERGIC2-001 protein_coding Homo_sapiens 0 941
ENST00000546509 ERGIC2-006 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000546839 ERGIC2-002 protein_coding Homo_sapiens 0 396
ENST00000548098 ERGIC2-008 retained_intron Homo_sapiens 0.00000000000002 82
ENST00000548909 ERGIC2-009 protein_coding Homo_sapiens 0 603
ENST00000549182 ERGIC2-010 nonsense_mediated_decay Homo_sapiens 6.99949e-42 174
ENST00000550353 ERGIC2-011 protein_coding Homo_sapiens 0 265
ENST00000551467 ERGIC2-005 protein_coding Homo_sapiens 0 571
ENST00000552132 ERGIC2-003 protein_coding Homo_sapiens 0 191
ENST00000552155 ERGIC2-004 protein_coding Homo_sapiens 0 196
ENST00000611644 ERGIC2-201 protein_coding Homo_sapiens 0 941

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