C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130242 Ergic2-003 ENSMUSG00000030304 10090 - 6:148189546-148212022 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000130242
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000130242 10.591±2.60 8.865±4.02 5.116±0.38 9.197±1.71 9.966±3.10 9.881±4.63 9.265±3.47 8.737±3.18 20.319±4.85 61.201±24.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0002 CGP 6:147475871-148182758
CIL_0006HR CIL_0006HR_0002 CGP 6:148047259-148212374

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360150 ERGIC2-001 protein_coding Homo_sapiens 0 758
ENST00000546509 ERGIC2-006 nonsense_mediated_decay Homo_sapiens 1e-32 143
ENST00000546839 ERGIC2-002 protein_coding Homo_sapiens 0 747
ENST00000548441 ERGIC2-007 protein_coding Homo_sapiens 0.000000000006 75
ENST00000548909 ERGIC2-009 protein_coding Homo_sapiens 2e-32 143
ENST00000550353 ERGIC2-011 protein_coding Homo_sapiens 0 529
ENST00000551467 ERGIC2-005 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000552132 ERGIC2-003 protein_coding Homo_sapiens 0 542
ENST00000552155 ERGIC2-004 protein_coding Homo_sapiens 0 492
ENST00000611644 ERGIC2-201 protein_coding Homo_sapiens 0 758

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