C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032446 Ergic2-015 ENSMUSG00000030304 10090 - 6:148181216-148212107 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryPlacentaTestisENSMUST00000032446
Transcript ID Bladder Liver Muscle Ovary Placenta Testis
ENSMUST00000032446 6.316±0.00 9.924±1.07 8.673±0.55 10.311±0.50 22.150±4.93 14.280±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0002 CGP 6:147475871-148182758
CIL_0006HR CIL_0006HR_0002 CGP 6:148047259-148212374

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360150 ERGIC2-001 protein_coding Homo_sapiens 0 1395
ENST00000546509 ERGIC2-006 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000546839 ERGIC2-002 protein_coding Homo_sapiens 0 573
ENST00000548098 ERGIC2-008 retained_intron Homo_sapiens 0 303
ENST00000548441 ERGIC2-007 protein_coding Homo_sapiens 0.000000000006 75
ENST00000548909 ERGIC2-009 protein_coding Homo_sapiens 0 603
ENST00000549182 ERGIC2-010 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000550353 ERGIC2-011 protein_coding Homo_sapiens 0 442
ENST00000551467 ERGIC2-005 protein_coding Homo_sapiens 0 793
ENST00000552132 ERGIC2-003 protein_coding Homo_sapiens 0 368
ENST00000552155 ERGIC2-004 protein_coding Homo_sapiens 0 318
ENST00000611644 ERGIC2-201 protein_coding Homo_sapiens 0 1395

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