C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1110004F10 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030663 1110004F10Rik 10090 + 7:116093301-116105210 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032899 1110004F10Rik-001 116093301-116105210 protein_coding
  ENSMUST00000106607 1110004F10Rik-002 116093341-116105207 protein_coding
  ENSMUST00000106608 1110004F10Rik-004 116093336-116104831 protein_coding
  ENSMUST00000151254 1110004F10Rik-003 116093366-116105210 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032899ENSMUST00000106607ENSMUST00000106608ENSMUST00000151254
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032899 19.162±1.00 30.683±1.17 40.605±3.57 56.650±32.73 20.769±0.89 20.420±2.25 16.938±4.58 26.496±1.25 33.516±13.19 25.867±3.85 18.310±1.49 28.790±6.92 37.608±15.59 20.696±6.71
ENSMUST00000106607 7.711±1.36 N/A N/A N/A 34.565±0.00 N/A 4.879±1.51 5.041±0.00 7.014±0.00 9.369±0.39 N/A 22.970±0.00 N/A N/A
ENSMUST00000106608 N/A N/A N/A 40.047±0.00 N/A N/A N/A N/A N/A N/A 3.244±0.00 28.476±19.76 45.730±7.15 51.670±0.00
ENSMUST00000151254 N/A N/A N/A N/A N/A N/A 2.133±0.00 N/A N/A N/A N/A 10.092±0.00 N/A 3.278±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081X CIL_00081X_0002 VISTA 7:115524528-116125832
CIL_0008LR CIL_0008LR_0002 VISTA 7:115564594-116167473
CIL_000836 CIL_000836_0002 VISTA 7:115904293-116509702
CIL_0003ZQ CIL_0003ZQ_0002 CGP 7:116093301-116308376

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022564 C18H11orf58 chromosome 11 open reading frame 58 protein_coding Danio_rerio
ENSG00000110696 C11orf58 chromosome 11 open reading frame 58 protein_coding Homo_sapiens

Loading