C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 11 open reading frame 58
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110696 C11orf58 9606 + 11:16613132-16756881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000228136 C11orf58-001 16738401-16756223 protein_coding
  ENST00000524439 C11orf58-004 16738644-16754906 protein_coding
  ENST00000524461 C11orf58-002 16746704-16755346 retained_intron
  ENST00000524508 C11orf58-009 16756025-16756881 processed_transcript
  ENST00000525106 C11orf58-008 16744236-16748196 retained_intron
  ENST00000525256 C11orf58-007 16738659-16748591 retained_intron
  ENST00000525684 C11orf58-006 16738658-16755067 protein_coding
  ENST00000527893 C11orf58-011 16613132-16748421 processed_transcript
  ENST00000528634 C11orf58-005 16738658-16754035 protein_coding
  ENST00000531658 C11orf58-003 16749114-16755347 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000228136ENST00000524439ENST00000525684ENST00000531658
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000228136 26.710±0.00 25.642±0.00 20.780±0.00 42.210±14.51 26.596±0.89 30.940±7.53 24.441±1.51 27.995±0.86 26.003±11.59 26.457±1.65 12.264±0.57 41.426±6.62 31.826±4.34 41.774±1.24
ENST00000524439 84.488±0.00 N/A N/A N/A N/A N/A N/A 52.382±0.00 N/A N/A N/A 113.683±0.00 147.721±0.00 154.971±0.00
ENST00000525684 N/A N/A 33.111±0.00 87.078±0.00 N/A 28.827±0.00 N/A 22.208±0.00 41.588±0.00 40.417±15.49 N/A 34.924±0.00 35.654±0.00 42.250±0.00
ENST00000531658 N/A N/A N/A N/A 5.707±0.00 N/A N/A N/A N/A 4.684±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZR CIL_0003ZR_0001 CGP 11:15112424-16739591
CIL_00081X CIL_00081X_0001 VISTA 11:16056231-16657544
CIL_0008LR CIL_0008LR_0001 VISTA 11:16101723-16704491
CIL_000836 CIL_000836_0001 VISTA 11:16591589-17196198
CIL_0003ZQ CIL_0003ZQ_0001 CGP 11:16613132-17014443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022564 C18H11orf58 chromosome 11 open reading frame 58 protein_coding Danio_rerio
ENSMUSG00000030663 1110004F10Rik RIKEN cDNA 1110004F10 gene protein_coding Mus_musculus

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