C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB6A, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030704 Rab6a 10090 + 7:100607410-100641268 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032946 Rab6a-001 100607586-100641268 protein_coding
  ENSMUST00000098252 Rab6a-002 100607690-100641268 protein_coding
  ENSMUST00000107048 Rab6a-003 100607410-100641268 protein_coding
  ENSMUST00000123960 Rab6a-004 100634348-100639363 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032946ENSMUST00000098252ENSMUST00000107048
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032946 13.428±5.87 20.113±5.26 34.821±4.46 60.504±13.31 23.680±15.15 39.783±7.20 9.187±0.48 11.716±2.17 15.738±8.34 31.138±6.59 26.445±3.35 39.954±18.38 18.476±7.99 12.641±5.09
ENSMUST00000098252 10.086±1.47 47.730±10.82 13.644±1.66 N/A 7.217±1.31 18.702±3.81 5.680±0.73 8.142±3.16 6.390±1.49 13.063±3.23 N/A 19.658±8.84 10.605±5.13 N/A
ENSMUST00000107048 N/A N/A N/A N/A 5.164±0.00 N/A N/A N/A N/A N/A N/A 9.524±3.53 9.695±2.52 2.293±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZZ CIL_0002ZZ_0002 CGP 7:100545751-100641268

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000042 ISS protein targeting to Golgi
GO:0001671 IEA ATPase activator activity
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 ISS GTP binding
GO:0005794 ISS Golgi apparatus
GO:0006184 ISS GTP catabolic process
GO:0006886 TAS intracellular protein transport
GO:0007264 IEA small GTPase mediated signal transduction
GO:0018125 ISO peptidyl-cysteine methylation
GO:0032781 IEA positive regulation of ATPase activity
GO:0051117 IEA ATPase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090667 rab6a RAB6A, member RAS oncogene family protein_coding Danio_rerio
ENSDARG00000091195 protein_coding Danio_rerio
ENSG00000175582 RAB6A RAB6A, member RAS oncogene family protein_coding Homo_sapiens
ENSG00000222014 RAB6C RAB6C, member RAS oncogene family protein_coding Homo_sapiens

Loading