C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S4, X-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031320 Rps4x 10090 - X:102184941-102189394 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033683 Rps4x-001 102184941-102189394 protein_coding
  ENSMUST00000152739 Rps4x-002 102187627-102189336 retained_intron
  ENSMUST00000155028 Rps4x-003 102185074-102186737 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033683ENSMUST00000155028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033683 292.706±126.66 32.815±2.36 903.252±45.95 199.758±119.73 281.409±101.63 165.462±24.39 170.131±7.02 199.859±32.99 441.657±379.12 240.097±29.64 216.810±15.70 297.094±326.75 428.914±252.42 14.886±6.63
ENSMUST00000155028 N/A 13.275±0.62 N/A N/A N/A N/A N/A N/A N/A N/A N/A 53.657±9.42 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RO CIL_0006RO_0002 CGP X:102141716-102189394
CIL_0000YL CIL_0000YL_0003 CGP X:102184941-102252181

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005840 ISS ribosome
GO:0005844 IEA polysome
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0007275 IEA multicellular organismal development
GO:0008284 IEA positive regulation of cell proliferation
GO:0015935 ISA small ribosomal subunit
GO:0016020 IEA membrane
GO:0019843 IEA rRNA binding
GO:0030529 ISS ribonucleoprotein complex
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0044822 IEA poly(A) RNA binding
GO:0045727 IEA positive regulation of translation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014690 rps4x ribosomal protein S4, X-linked protein_coding Danio_rerio
ENSG00000198034 RPS4X ribosomal protein S4, X-linked protein_coding Homo_sapiens

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