C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000YL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014690-ENSDARG00000077769 CGP 7955 7:53088995-53103912
GeneTranscriptPositionBiotype
ENSDARG00000077769 (cited1)
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1
ENSDART00000109055 (cited1-201) 53097855-53103912 protein_coding
CIL_0000YL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198034-ENSG00000125931 CGP 9606 X:72255679-72307187
GeneTranscriptPositionBiotype
ENSG00000102309 (PIN4)
protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
ENST00000218432 (PIN4-002) 72181676-72198337 protein_coding
ENST00000373662 (PIN4-004) 72181353-72197101 nonsense_mediated_decay
ENST00000373669 (PIN4-001) 72181679-72198344 protein_coding
ENST00000423432 (PIN4-201) 72181676-72263964 protein_coding
ENST00000439980 (PIN4-006) 72181765-72302926 nonsense_mediated_decay
ENST00000446576 (PIN4-003) 72181794-72197354 protein_coding
ENST00000496835 (PIN4-005) 72181765-72263126 protein_coding
ENSG00000198034 (RPS4X)
ribosomal protein S4, X-linked
ENST00000316084 (RPS4X-001) 72272042-72277300 protein_coding
ENST00000373626 (RPS4X-002) 72274255-72277248 protein_coding
ENST00000470671 (RPS4X-004) 72255679-72273371 processed_transcript
ENST00000486733 (RPS4X-003) 72272713-72276227 processed_transcript
ENST00000492695 (RPS4X-005) 72255784-72272723 processed_transcript
CIL_0000YL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031320-ENSMUSG00000051159 CGP 10090 X:102184941-102252181
GeneTranscriptPositionBiotype
ENSMUSG00000031320 (Rps4x)
ribosomal protein S4, X-linked
ENSMUST00000033683 (Rps4x-001) 102184941-102189394 protein_coding
ENSMUST00000152739 (Rps4x-002) 102187627-102189336 retained_intron
ENSMUST00000155028 (Rps4x-003) 102185074-102186737 retained_intron
ENSMUSG00000051159 (Cited1)
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
ENSMUST00000050551 (Cited1-001) 102247381-102252181 protein_coding
ENSMUST00000101336 (Cited1-002) 102247404-102251852 protein_coding
ENSMUST00000130589 (Cited1-003) 102247821-102250775 protein_coding
ENSMUST00000134887 (Cited1-005) 102247714-102250946 protein_coding
ENSMUST00000136277 (Cited1-004) 102247886-102251918 protein_coding
ENSMUSG00000081263 (Gm14859)
predicted gene 14859
ENSMUST00000117752 (Gm14859-001) 102208402-102208758 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YL_0001ENSDARG00000077769ENSDART00000109055CIL_0000YL_0002ENSG00000102309ENST00000218432ENST00000373662ENST00000373669ENST00000423432ENST00000439980ENST00000446576ENST00000496835ENSG00000198034ENST00000316084ENST00000373626ENST00000470671ENST00000486733ENST00000492695CIL_0000YL_0003ENSMUSG00000031320ENSMUST00000033683ENSMUST00000152739ENSMUST00000155028ENSMUSG00000051159ENSMUST00000050551ENSMUST00000101336ENSMUST00000130589ENSMUST00000134887ENSMUST00000136277ENSMUSG00000081263ENSMUST00000117752
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YL_0001ENSDARG00000077769ENSDART00000109055CIL_0000YL_0002ENSG00000102309ENST00000218432ENST00000373669ENST00000423432ENST00000439980ENST00000446576ENSG00000198034ENST00000316084CIL_0000YL_0003ENSMUSG00000031320ENSMUST00000033683ENSMUST00000155028ENSMUSG00000051159ENSMUST00000050551ENSMUST00000101336ENSMUST00000130589ENSMUST00000134887ENSMUST00000136277ENSMUSG00000081263ENSMUST00000117752
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077769 ENSDART00000109055 N/A N/A N/A 4.770±1.28 N/A N/A 16.192±2.65 9.292±2.51 0.936±0.00 N/A 3.892±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102309 ENST00000218432 N/A N/A 0.592±0.00 N/A N/A 0.478±0.00 N/A N/A N/A 0.458±0.00 N/A 0.327±0.00 N/A N/A
ENST00000373662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373669 3.285±0.00 4.447±0.00 N/A 4.466±0.40 3.184±1.78 4.108±2.82 1.596±0.81 3.442±2.80 2.415±1.79 1.099±0.34 1.877±0.37 4.737±2.96 6.312±1.79 5.102±1.29
ENST00000423432 N/A 1.300±0.00 N/A 1.439±0.00 N/A N/A 0.085±0.00 N/A N/A N/A N/A 0.212±0.00 N/A N/A
ENST00000439980 N/A N/A 0.346±0.00 N/A N/A 6.018±0.00 N/A 2.463±1.78 3.834±0.00 3.701±0.00 2.894±0.00 9.763±0.00 5.787±3.33 N/A
ENST00000446576 N/A N/A N/A N/A N/A N/A 0.175±0.00 N/A 0.495±0.00 0.416±0.00 N/A N/A N/A N/A
ENST00000496835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198034 ENST00000316084 487.882±0.00 130.741±0.00 54.367±0.00 107.688±23.11 248.881±167.76 402.691±271.14 44.753±7.05 185.131±94.35 109.396±2.13 260.979±147.04 85.879±57.99 617.922±540.41 472.887±367.41 180.759±142.29
ENST00000373626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031320 ENSMUST00000033683 292.706±126.66 32.815±2.36 903.252±45.95 199.758±119.73 281.409±101.63 165.462±24.39 170.131±7.02 199.859±32.99 441.657±379.12 240.097±29.64 216.810±15.70 297.094±326.75 428.914±252.42 14.886±6.63
ENSMUST00000152739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155028 N/A 13.275±0.62 N/A N/A N/A N/A N/A N/A N/A N/A N/A 53.657±9.42 N/A N/A
ENSMUSG00000051159 ENSMUST00000050551 0.700±0.55 4.349±3.43 0.163±0.06 2.164±1.28 45.951±13.54 0.226±0.13 1.301±0.44 1.019±0.48 21.401±24.35 0.110±0.07 0.177±0.09 7.004±3.51 320.058±256.62 27.451±12.14
ENSMUST00000101336 0.389±0.02 0.903±0.43 0.069±0.00 1.072±0.53 N/A 0.073±0.03 N/A 0.345±0.21 N/A 0.081±0.01 N/A 1.749±0.59 N/A N/A
ENSMUST00000130589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A
ENSMUST00000134887 N/A 2.423±0.37 N/A N/A 11.213±0.00 N/A N/A 0.523±0.00 N/A N/A 0.207±0.00 1.446±0.00 N/A N/A
ENSMUST00000136277 N/A N/A N/A 1.117±0.00 N/A 0.554±0.00 N/A N/A N/A 0.100±0.00 N/A 8.802±0.00 310.482±205.85 N/A
ENSMUSG00000081263 ENSMUST00000117752 0.189±0.00 N/A 0.043±0.00 N/A N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A 0.199±0.17 N/A

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