C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088429 Atp2b3-001 ENSMUSG00000031376 10090 + X:73503086-73571005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000088429
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000088429 0.030±0.00 2.734±0.00 1.315±0.17 0.105±0.02 0.188±0.11 0.062±0.00 0.046±0.00 0.027±0.00 1.024±0.07 0.018±0.00 0.223±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0002 CGP X:73483602-73571005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0031982 IEA vesicle
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000135811 atp2b3a-001 protein_coding Danio_rerio 0 1808
ENSDART00000090252 atp2b3a-202 protein_coding Danio_rerio 0 1762
ENSDART00000093117 atp2b3a-002 protein_coding Danio_rerio 0 1762
ENSDART00000014257 atp2b1a-201 protein_coding Danio_rerio 0 1290
ENSDART00000128079 atp2b1a-202 protein_coding Danio_rerio 0 1109
ENSDART00000077664 atp2b1a-001 protein_coding Danio_rerio 0 1109
ENSDART00000104353 atp2b1b-001 protein_coding Danio_rerio 0 1018
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 4632
ENST00000341360 ATP2B4-002 protein_coding Homo_sapiens 0 1456
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 4822
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1792
ENST00000357681 ATP2B4-001 protein_coding Homo_sapiens 0 1472
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 4193
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1792
ENST00000367218 ATP2B4-201 protein_coding Homo_sapiens 0 1456
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 2987
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1792
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 2987
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1792
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 2174
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1722
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 425
ENST00000496610 ATP2B3-005 processed_transcript Homo_sapiens 0 442

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