C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001V0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182492-ENSG00000067842 CGP 9606 X:153494939-153582939
GeneTranscriptPositionBiotype
ENSG00000067842 (ATP2B3)
ATPase, Ca++ transporting, plasma membrane 3
ENST00000263519 (ATP2B3-201) 153536122-153582929 protein_coding
ENST00000349466 (ATP2B3-002) 153517676-153580589 protein_coding
ENST00000359149 (ATP2B3-006) 153536122-153580589 protein_coding
ENST00000370186 (ATP2B3-001) 153517676-153582939 protein_coding
ENST00000393842 (ATP2B3-004) 153532934-153569962 protein_coding
ENST00000460549 (ATP2B3-003) 153556946-153560824 processed_transcript
ENST00000496610 (ATP2B3-005) 153569648-153580569 processed_transcript
ENSG00000182492 (BGN)
biglycan
ENST00000331595 (BGN-001) 153494939-153509554 protein_coding
ENST00000431891 (BGN-002) 153494993-153506626 protein_coding
ENST00000472615 (BGN-004) 153494981-153509546 processed_transcript
ENST00000480756 (BGN-005) 153494983-153509546 processed_transcript
ENST00000492658 (BGN-006) 153505869-153508805 processed_transcript
CIL_0001V0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031375-ENSMUSG00000031376 CGP 10090 X:73483602-73571005
GeneTranscriptPositionBiotype
ENSMUSG00000031375 (Bgn)
biglycan
ENSMUST00000033741 (Bgn-001) 73483602-73495933 protein_coding
ENSMUST00000130873 (Bgn-008) 73483633-73486298 retained_intron
ENSMUST00000133394 (Bgn-005) 73483602-73492746 processed_transcript
ENSMUST00000140803 (Bgn-002) 73483639-73492382 retained_intron
ENSMUST00000141945 (Bgn-003) 73483623-73492398 retained_intron
ENSMUST00000155231 (Bgn-006) 73492057-73493310 processed_transcript
ENSMUST00000169489 (Bgn-201) 73483635-73495929 protein_coding
ENSMUST00000183174 (Bgn-009) 73494892-73495926 processed_transcript
ENSMUSG00000031376 (Atp2b3)
ATPase, Ca++ transporting, plasma membrane 3
ENSMUST00000033744 (Atp2b3-003) 73503086-73558214 protein_coding
ENSMUST00000088429 (Atp2b3-001) 73503086-73571005 protein_coding
ENSMUST00000114479 (Atp2b3-002) 73503086-73571005 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V0_0001ENSG00000067842ENST00000263519ENST00000349466ENST00000359149ENST00000370186ENST00000393842ENST00000460549ENST00000496610ENSG00000182492ENST00000331595ENST00000431891ENST00000472615ENST00000480756ENST00000492658CIL_0001V0_0002ENSMUSG00000031375ENSMUST00000033741ENSMUST00000130873ENSMUST00000133394ENSMUST00000140803ENSMUST00000141945ENSMUST00000155231ENSMUST00000169489ENSMUST00000183174ENSMUSG00000031376ENSMUST00000033744ENSMUST00000088429ENSMUST00000114479
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V0_0001ENSG00000067842ENST00000263519ENST00000359149ENST00000370186ENST00000393842ENST00000496610ENSG00000182492ENST00000331595ENST00000472615ENST00000480756ENST00000492658CIL_0001V0_0002ENSMUSG00000031375ENSMUST00000033741ENSMUST00000133394ENSMUST00000155231ENSMUST00000169489ENSMUSG00000031376ENSMUST00000033744ENSMUST00000088429ENSMUST00000114479
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067842 ENST00000263519 N/A 0.022±0.00 N/A 3.593±1.72 0.015±0.01 N/A N/A 0.011±0.00 N/A 0.003±0.00 N/A N/A 0.058±0.02 0.156±0.00
ENST00000349466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000359149 N/A N/A 0.051±0.00 2.960±0.00 N/A N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A N/A
ENST00000370186 N/A N/A N/A 6.101±0.00 N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A 0.063±0.00 0.023±0.00
ENST00000393842 0.006±0.00 N/A N/A N/A N/A 0.048±0.00 N/A N/A 0.168±0.00 N/A N/A 0.026±0.00 N/A 0.167±0.00
ENST00000460549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496610 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A
ENSG00000182492 ENST00000331595 21.082±0.00 N/A 7.259±0.00 3.520±2.17 12.895±0.00 0.940±0.00 28.542±27.00 44.065±33.97 13.287±8.82 94.783±89.51 11.238±10.36 94.906±58.88 388.803±95.96 42.873±1.24
ENST00000431891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472615 16.064±0.00 95.964±0.00 N/A 16.847±0.00 41.981±0.00 19.326±0.00 N/A N/A 13.892±0.00 53.976±0.00 N/A N/A N/A 97.599±0.00
ENST00000480756 37.722±0.00 167.702±0.00 N/A 32.161±0.00 60.463±0.00 37.038±0.00 14.365±0.00 103.024±0.00 41.041±0.00 91.105±0.00 N/A 24.196±0.00 N/A 173.819±0.00
ENST00000492658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.860±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031375 ENSMUST00000033741 122.838±15.90 118.005±10.89 284.741±34.24 12.362±8.75 100.642±15.85 80.392±17.85 97.180±15.99 98.620±5.39 24.734±9.26 285.581±20.88 12.051±2.01 166.640±54.80 23.518±19.18 11.396±5.30
ENSMUST00000130873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.429±0.00 N/A
ENSMUST00000140803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155231 N/A N/A N/A 4.415±0.00 N/A N/A N/A N/A N/A N/A N/A 183.106±0.00 36.488±25.02 N/A
ENSMUST00000169489 N/A N/A N/A N/A N/A 19.542±5.94 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031376 ENSMUST00000033744 0.021±0.01 9.528±3.11 N/A N/A 0.346±0.06 0.182±0.02 0.019±0.00 0.063±0.01 0.011±0.00 0.018±0.00 0.818±0.11 0.787±0.19 0.060±0.01 0.487±0.29
ENSMUST00000088429 0.030±0.00 2.734±0.00 N/A 1.315±0.17 0.105±0.02 0.188±0.11 0.062±0.00 0.046±0.00 N/A 0.027±0.00 N/A 1.024±0.07 0.018±0.00 0.223±0.05
ENSMUST00000114479 N/A 6.322±2.29 N/A 1.590±0.63 N/A 0.131±0.04 0.037±0.01 0.051±0.02 N/A N/A N/A 1.292±0.66 N/A 0.427±0.02

Loading