C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031770 Herpud1 10090 + 8:94386438-94395377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034220 Herpud1-002 94386495-94395358 protein_coding
  ENSMUST00000159450 Herpud1-004 94387599-94392309 processed_transcript
  ENSMUST00000160866 Herpud1-005 94393531-94394909 retained_intron
  ENSMUST00000161085 Herpud1-003 94387553-94392469 processed_transcript
  ENSMUST00000161576 Herpud1-001 94386438-94395377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034220ENSMUST00000161085ENSMUST00000161576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034220 13.688±3.58 48.743±6.17 31.822±3.36 2.740±0.19 26.602±7.55 97.715±16.95 25.831±6.53 81.613±24.35 72.480±53.64 78.592±46.97 8.129±1.11 50.188±41.59 6.943±2.47 15.250±0.00
ENSMUST00000161085 N/A N/A N/A 5.760±0.00 N/A N/A N/A N/A N/A N/A N/A 15.254±2.33 10.550±5.17 33.096±0.00
ENSMUST00000161576 45.355±5.26 48.724±20.26 101.988±6.27 12.211±8.01 68.034±44.92 90.540±26.30 64.983±20.85 125.896±21.26 69.617±31.45 125.048±26.19 47.216±10.87 104.949±48.72 19.335±9.19 72.071±36.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0003 CGP 8:94329192-94395377

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 ISO endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0006874 IEA cellular calcium ion homeostasis
GO:0006986 IEA response to unfolded protein
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0030968 IDA endoplasmic reticulum unfolded protein response
GO:0031396 IMP regulation of protein ubiquitination
GO:0032092 IMP positive regulation of protein binding
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024314 herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein_coding Danio_rerio
ENSG00000051108 HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein_coding Homo_sapiens

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