C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161576 Herpud1-001 ENSMUSG00000031770 10090 + 8:94386438-94395377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161576 45.355±5.26 48.724±20.26 101.988±6.27 12.211±8.01 68.034±44.92 90.540±26.30 64.983±20.85 125.896±21.26 69.617±31.45 125.048±26.19 47.216±10.87 104.949±48.72 19.335±9.19 72.071±36.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0003 CGP 8:94329192-94395377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 ISO endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0006874 IEA cellular calcium ion homeostasis
GO:0006986 IEA response to unfolded protein
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0030968 IDA endoplasmic reticulum unfolded protein response
GO:0031396 IMP regulation of protein ubiquitination
GO:0032092 IMP positive regulation of protein binding
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300302 HERPUD1-002 protein_coding Homo_sapiens 0 1410
ENST00000344114 HERPUD1-004 protein_coding Homo_sapiens 0 477
ENST00000379792 HERPUD1-003 protein_coding Homo_sapiens 0 1066
ENST00000439977 HERPUD1-001 protein_coding Homo_sapiens 0 1452
ENST00000562914 HERPUD1-009 retained_intron Homo_sapiens 0 296
ENST00000563343 HERPUD1-013 protein_coding Homo_sapiens 0 510
ENST00000563781 HERPUD1-017 processed_transcript Homo_sapiens 0 843
ENST00000563911 HERPUD1-016 protein_coding Homo_sapiens 0 521
ENST00000564678 HERPUD1-007 retained_intron Homo_sapiens 0 1062
ENST00000565966 HERPUD1-020 nonsense_mediated_decay Homo_sapiens 0 785
ENST00000566550 HERPUD1-011 retained_intron Homo_sapiens 0 195
ENST00000567944 HERPUD1-018 retained_intron Homo_sapiens 0 416
ENST00000568358 HERPUD1-019 protein_coding Homo_sapiens 0 243
ENST00000568651 HERPUD1-014 protein_coding Homo_sapiens 0 344
ENST00000568676 HERPUD1-010 retained_intron Homo_sapiens 0 377
ENST00000568814 HERPUD1-015 processed_transcript Homo_sapiens 0 276
ENST00000569429 HERPUD1-012 protein_coding Homo_sapiens 0 394
ENST00000569569 HERPUD1-005 retained_intron Homo_sapiens 0 496
ENST00000570273 HERPUD1-006 processed_transcript Homo_sapiens 0 881

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