C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034220 Herpud1-002 ENSMUSG00000031770 10090 + 8:94386495-94395358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034220 13.688±3.58 48.743±6.17 31.822±3.36 2.740±0.19 26.602±7.55 97.715±16.95 25.831±6.53 81.613±24.35 72.480±53.64 78.592±46.97 8.129±1.11 50.188±41.59 6.943±2.47 15.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0003 CGP 8:94329192-94395377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 ISO endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0016021 IDA integral component of membrane
GO:0030968 IDA endoplasmic reticulum unfolded protein response
GO:0031396 IMP regulation of protein ubiquitination
GO:0032092 IMP positive regulation of protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300302 HERPUD1-002 protein_coding Homo_sapiens 0 1424
ENST00000344114 HERPUD1-004 protein_coding Homo_sapiens 0 492
ENST00000379792 HERPUD1-003 protein_coding Homo_sapiens 0 1066
ENST00000439977 HERPUD1-001 protein_coding Homo_sapiens 0 1410
ENST00000562914 HERPUD1-009 retained_intron Homo_sapiens 0 298
ENST00000563343 HERPUD1-013 protein_coding Homo_sapiens 0 490
ENST00000563781 HERPUD1-017 processed_transcript Homo_sapiens 0 837
ENST00000563911 HERPUD1-016 protein_coding Homo_sapiens 0 521
ENST00000564678 HERPUD1-007 retained_intron Homo_sapiens 0 1062
ENST00000565966 HERPUD1-020 nonsense_mediated_decay Homo_sapiens 0 767
ENST00000566550 HERPUD1-011 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000567944 HERPUD1-018 retained_intron Homo_sapiens 0 416
ENST00000568358 HERPUD1-019 protein_coding Homo_sapiens 0 243
ENST00000568651 HERPUD1-014 protein_coding Homo_sapiens 0 344
ENST00000568676 HERPUD1-010 retained_intron Homo_sapiens 0 357
ENST00000568814 HERPUD1-015 processed_transcript Homo_sapiens 0 276
ENST00000569429 HERPUD1-012 protein_coding Homo_sapiens 0 394
ENST00000569569 HERPUD1-005 retained_intron Homo_sapiens 0 475
ENST00000570273 HERPUD1-006 processed_transcript Homo_sapiens 0 861

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