C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161085 Herpud1-003 ENSMUSG00000031770 10090 + 8:94387553-94392469 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000161085
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000161085 5.760±0.00 15.254±2.33 10.550±5.17 33.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0003 CGP 8:94329192-94395377

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300302 HERPUD1-002 protein_coding Homo_sapiens 0 791
ENST00000344114 HERPUD1-004 protein_coding Homo_sapiens 0 292
ENST00000379792 HERPUD1-003 protein_coding Homo_sapiens 0 632
ENST00000439977 HERPUD1-001 protein_coding Homo_sapiens 0 811
ENST00000562914 HERPUD1-009 retained_intron Homo_sapiens 6e-23 111
ENST00000563343 HERPUD1-013 protein_coding Homo_sapiens 0 510
ENST00000563781 HERPUD1-017 processed_transcript Homo_sapiens 0 704
ENST00000563911 HERPUD1-016 protein_coding Homo_sapiens 0 363
ENST00000564678 HERPUD1-007 retained_intron Homo_sapiens 0 628
ENST00000565966 HERPUD1-020 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000566550 HERPUD1-011 retained_intron Homo_sapiens 0 193
ENST00000567944 HERPUD1-018 retained_intron Homo_sapiens 0 416
ENST00000568676 HERPUD1-010 retained_intron Homo_sapiens 0 193
ENST00000569429 HERPUD1-012 protein_coding Homo_sapiens 0 394
ENST00000569569 HERPUD1-005 retained_intron Homo_sapiens 0 311
ENST00000570273 HERPUD1-006 processed_transcript Homo_sapiens 0 697

Loading