C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysyl-tRNA synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031948 Kars 10090 - 8:111993440-112011323 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034426 Kars-201 111993444-112011323 protein_coding
  ENSMUST00000093120 Kars-202 111993440-112011288 protein_coding
  ENSMUST00000164470 Kars-203 111993444-112011266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034426ENSMUST00000093120ENSMUST00000164470
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034426 18.961±0.95 10.454±1.08 24.606±1.92 23.275±9.55 17.113±3.81 23.552±3.97 17.532±0.93 20.951±1.73 25.678±13.67 17.365±1.74 23.885±1.63 33.587±6.05 37.693±24.41 28.188±6.00
ENSMUST00000093120 14.049±6.26 4.598±1.15 6.430±1.07 10.736±1.15 5.449±1.04 6.455±1.17 5.664±1.22 5.452±1.08 5.704±1.73 3.018±0.37 10.735±1.99 7.494±3.68 11.274±9.95 3.396±0.45
ENSMUST00000164470 N/A 3.267±0.29 N/A N/A 4.214±0.00 4.484±0.00 N/A N/A N/A 2.210±0.00 3.635±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D7 CIL_0002D7_0002 CGP 8:111966908-112011323
CIL_0003YT CIL_0003YT_0002 CGP 8:111993440-112020528

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0003676 IEA nucleic acid binding
GO:0004824 IEA lysine-tRNA ligase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006430 IEA lysyl-tRNA aminoacylation
GO:0015630 IEA microtubule cytoskeleton
GO:0015966 IEA diadenosine tetraphosphate biosynthetic process
GO:0016597 IEA amino acid binding
GO:0017101 IEA aminoacyl-tRNA synthetase multienzyme complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044220 kars lysyl-tRNA synthetase protein_coding Danio_rerio
ENSG00000065427 KARS lysyl-tRNA synthetase protein_coding Homo_sapiens

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