C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: radixin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032050 Rdx 10090 + 9:52047150-52088737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000590 Rdx-201 52047941-52088737 protein_coding
  ENSMUST00000061352 Rdx-202 52047941-52075177 protein_coding
  ENSMUST00000163153 Rdx-203 52047150-52088737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000590ENSMUST00000061352ENSMUST00000163153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000590 3.202±1.21 N/A 5.463±0.00 5.674±0.93 2.916±0.66 1.088±0.19 2.278±0.58 6.467±0.51 4.552±1.74 7.436±1.99 25.540±3.40 5.749±1.49 20.937±21.99 7.484±2.18
ENSMUST00000061352 N/A 3.573±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.489±0.11
ENSMUST00000163153 16.345±2.19 12.930±1.90 12.841±0.86 17.749±2.32 7.949±2.84 3.419±0.46 12.251±1.44 17.606±2.91 24.358±6.79 27.058±6.56 7.352±1.93 31.922±17.62 41.793±15.05 4.605±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DH CIL_0008DH_0002 VISTA 9:51847924-52450392

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005902 IDA microvillus
GO:0005925 IEA focal adhesion
GO:0008092 IEA cytoskeletal protein binding
GO:0010628 IEA positive regulation of gene expression
GO:0019898 IEA extrinsic component of membrane
GO:0030027 IDA lamellipodium
GO:0030033 IMP microvillus assembly
GO:0030175 IDA filopodium
GO:0030315 IEA T-tubule
GO:0032420 IDA stereocilium
GO:0044822 IEA poly(A) RNA binding
GO:0045176 IMP apical protein localization
GO:0045177 IDA apical part of cell
GO:0051286 IEA cell tip
GO:0051693 IEA actin filament capping
GO:0061028 IEA establishment of endothelial barrier
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137710 RDX radixin protein_coding Homo_sapiens

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