C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) subunit, alpha type 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032301 Psma4 10090 + 9:54950790-54958030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034848 Psma4-001 54950790-54958030 protein_coding
  ENSMUST00000163960 Psma4-007 54950815-54952806 processed_transcript
  ENSMUST00000164679 Psma4-005 54950890-54953426 retained_intron
  ENSMUST00000169008 Psma4-006 54950805-54955032 retained_intron
  ENSMUST00000171578 Psma4-003 54950798-54956386 retained_intron
  ENSMUST00000171900 Psma4-004 54951104-54956299 protein_coding
  ENSMUST00000172407 Psma4-002 54950815-54956933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034848ENSMUST00000169008ENSMUST00000171578ENSMUST00000171900ENSMUST00000172407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034848 37.508±2.94 12.087±4.30 65.517±9.14 74.478±13.09 32.496±11.78 19.396±2.91 19.127±0.44 46.060±5.86 63.777±21.46 19.293±3.10 52.594±6.97 47.121±46.74 121.721±61.90 51.282±55.90
ENSMUST00000169008 N/A 7.950±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.363±0.00 N/A N/A
ENSMUST00000171578 N/A 6.932±2.42 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.349±0.50 N/A N/A
ENSMUST00000171900 N/A 4.245±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.011±1.29
ENSMUST00000172407 20.369±2.26 6.855±1.27 N/A N/A 30.315±15.16 9.755±1.70 37.160±2.97 24.156±2.02 21.146±3.31 14.966±3.18 13.629±0.30 17.743±7.17 N/A 11.303±2.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TW CIL_0003TW_0002 CGP 9:54950790-55007779

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045928 psma4 proteasome (prosome, macropain) subunit, alpha type, 4 protein_coding Danio_rerio
ENSG00000041357 PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 protein_coding Homo_sapiens

Loading