C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171900 Psma4-004 ENSMUSG00000032301 10090 + 9:54951104-54956299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalTestisENSMUST00000171900
Transcript ID Adrenal Testis
ENSMUST00000171900 4.245±1.11 12.011±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TW CIL_0003TW_0002 CGP 9:54950790-55007779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005839 IDA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000044462 PSMA4-001 protein_coding Homo_sapiens 0 638
ENST00000413382 PSMA4-004 protein_coding Homo_sapiens 5e-21 106
ENST00000557929 PSMA4-005 processed_transcript Homo_sapiens 0 638
ENST00000558281 PSMA4-019 protein_coding Homo_sapiens 0 638
ENST00000558341 PSMA4-017 protein_coding Homo_sapiens 0 457
ENST00000558639 PSMA4-010 retained_intron Homo_sapiens 0 451
ENST00000559082 PSMA4-006 protein_coding Homo_sapiens 0 638
ENST00000559146 PSMA4-018 protein_coding Homo_sapiens 0 346
ENST00000559365 PSMA4-015 protein_coding Homo_sapiens 0 638
ENST00000559437 PSMA4-016 protein_coding Homo_sapiens 0 638
ENST00000559934 PSMA4-002 retained_intron Homo_sapiens 0 538
ENST00000559948 PSMA4-014 protein_coding Homo_sapiens 0 536
ENST00000560033 PSMA4-007 retained_intron Homo_sapiens 0 246
ENST00000560217 PSMA4-009 protein_coding Homo_sapiens 0 399
ENST00000560737 PSMA4-012 protein_coding Homo_sapiens 0 638
ENST00000560842 PSMA4-011 retained_intron Homo_sapiens 8e-22 108

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