C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10 (sodium/bile acid cotransporter family), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114146 Slc10a3-003 ENSMUSG00000032806 10090 - X:74369217-74373246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000114146
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114146 6.603±0.91 14.300±4.23 8.429±3.36 10.509±3.69 5.438±0.00 3.932±0.66 10.414±1.72 19.649±4.82 5.262±0.00 0.164±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KI CIL_0006KI_0002 CGP X:74351276-74373218
CIL_0003LF CIL_0003LF_0002 CGP X:74365718-74373349
CIL_0003LG CIL_0003LG_0002 CGP X:74369217-74393272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0010033 IDA response to organic substance
GO:0015721 IEA bile acid and bile salt transport
GO:0016021 IEA integral component of membrane
GO:0032526 IDA response to retinoic acid
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263512 SLC10A3-201 protein_coding Homo_sapiens 0 1354
ENST00000369649 SLC10A3-001 protein_coding Homo_sapiens 0 1057
ENST00000393586 SLC10A3-004 protein_coding Homo_sapiens 0 1395
ENST00000393587 SLC10A3-002 protein_coding Homo_sapiens 0 1354
ENST00000453912 SLC10A3-003 protein_coding Homo_sapiens 0 481

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