C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CLIP associating protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033392 Clasp2 10090 + 9:113812586-113919697 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111838 Clasp2-201 113812586-113919697 protein_coding
  ENSMUST00000163895 Clasp2-202 113812600-113918136 protein_coding
  ENSMUST00000166734 Clasp2-203 113812586-113919697 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000111838ENSMUST00000163895ENSMUST00000166734
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000111838 N/A 5.189±0.00 20.292±6.30 1.427±0.30 0.786±0.29 N/A N/A 0.660±0.21 2.778±0.00 6.068±0.00 N/A N/A
ENSMUST00000163895 N/A N/A 31.890±0.00 N/A N/A N/A N/A N/A N/A 8.161±0.00 2.042±0.08 1.378±0.00
ENSMUST00000166734 4.769±0.53 8.801±2.53 15.259±0.40 2.389±1.33 0.801±0.30 1.393±0.55 4.068±0.28 1.150±0.87 2.780±0.00 8.937±6.21 1.332±0.89 0.379±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DD CIL_0003DD_0002 CGP 9:113812586-113977199

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005874 IEA microtubule
GO:0005881 IDA cytoplasmic microtubule
GO:0007026 IDA negative regulation of microtubule depolymerization
GO:0007163 IMP establishment or maintenance of cell polarity
GO:0008017 IDA microtubule binding
GO:0016477 IMP cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020345 clasp2 cytoplasmic linker associated protein 2 protein_coding Danio_rerio
ENSG00000163539 CLASP2 cytoplasmic linker associated protein 2 protein_coding Homo_sapiens

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