C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: insulin-like growth factor 2 mRNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033581 Igf2bp2 10090 - 16:22059009-22163299 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100052 Igf2bp2-001 22059009-22163299 protein_coding
  ENSMUST00000115379 Igf2bp2-004 22059460-22161450 protein_coding
  ENSMUST00000124318 Igf2bp2-007 22061366-22063697 retained_intron
  ENSMUST00000125926 Igf2bp2-005 22151464-22162992 processed_transcript
  ENSMUST00000127696 Igf2bp2-002 22160881-22162975 retained_intron
  ENSMUST00000129913 Igf2bp2-003 22059055-22163019 retained_intron
  ENSMUST00000134188 Igf2bp2-009 22059074-22089118 retained_intron
  ENSMUST00000146885 Igf2bp2-006 22076018-22079118 retained_intron
  ENSMUST00000151087 Igf2bp2-008 22083942-22137209 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100052ENSMUST00000115379ENSMUST00000127696ENSMUST00000129913ENSMUST00000134188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100052 1.141±0.74 0.584±0.14 0.530±0.09 1.696±0.20 0.392±0.15 3.745±0.84 0.282±0.10 0.702±0.29 0.896±0.37 1.307±0.13 0.216±0.01 1.026±0.40 6.203±2.09 0.132±0.08
ENSMUST00000115379 0.616±0.46 1.270±0.00 0.238±0.00 1.669±0.65 0.253±0.09 1.577±0.55 0.417±0.15 0.544±0.11 0.679±0.63 0.754±0.25 0.502±0.00 1.360±0.69 16.203±14.04 0.082±0.04
ENSMUST00000127696 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A
ENSMUST00000129913 0.051±0.00 0.152±0.00 0.135±0.03 0.927±0.17 N/A 0.559±0.00 0.102±0.01 0.133±0.00 0.081±0.00 N/A 0.059±0.00 0.367±0.11 N/A 0.028±0.00
ENSMUST00000134188 N/A 0.802±0.36 0.391±0.17 0.780±0.63 0.086±0.00 2.673±0.00 N/A 0.308±0.00 0.910±0.74 0.665±0.17 0.197±0.09 1.612±0.67 14.086±7.79 0.222±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0006RH CIL_0006RH_0002 CGP 16:22009484-22163299
CIL_0003YC CIL_0003YC_0003 CGP 16:22059009-22266005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005856 ISS cytoskeleton
GO:0006417 IEA regulation of translation
GO:0044822 IEA poly(A) RNA binding
GO:0048027 ISS mRNA 5'-UTR binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003421 igf2bp2a insulin-like growth factor 2 mRNA binding protein 2a protein_coding Danio_rerio
ENSDARG00000061661 igf2bp2b insulin-like growth factor 2 mRNA binding protein 2b protein_coding Danio_rerio
ENSG00000073792 IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 protein_coding Homo_sapiens

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