C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003421-ENSDARG00000002168 CGP 7955 9:12738982-12871009
GeneTranscriptPositionBiotype
ENSDARG00000002168 (tra2b)
transformer 2 beta homolog (Drosophila) 		ENSDART00000021266 (tra2b-001) 12855309-12870991 protein_coding
ENSDART00000132331 (tra2b-005) 12858498-12870949 processed_transcript
ENSDART00000142024 (tra2b-003) 12866188-12871009 retained_intron
ENSDART00000146059 (tra2b-002) 12861135-12870937 processed_transcript
ENSDART00000146127 (tra2b-004) 12860875-12870955 processed_transcript
CIL_0003YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073792-ENSG00000136527 CGP 9606 3:185643739-185938136
GeneTranscriptPositionBiotype
ENSG00000073792 (IGF2BP2)
insulin-like growth factor 2 mRNA binding protein 2 		ENST00000346192 (IGF2BP2-002) 185643975-185825024 protein_coding
ENST00000382199 (IGF2BP2-001) 185643739-185825056 protein_coding
ENST00000421047 (IGF2BP2-201) 185645501-185821131 protein_coding
ENST00000457616 (IGF2BP2-008) 185643975-185825012 protein_coding
ENST00000461957 (IGF2BP2-005) 185689455-185823271 processed_transcript
ENST00000464166 (IGF2BP2-003) 185646880-185649523 processed_transcript
ENST00000466214 (IGF2BP2-009) 185814055-185821103 processed_transcript
ENST00000466476 (IGF2BP2-006) 185696415-185824892 processed_transcript
ENST00000493302 (IGF2BP2-007) 185689555-185821131 processed_transcript
ENST00000494906 (IGF2BP2-010) 185649403-185689238 processed_transcript
ENST00000496495 (IGF2BP2-004) 185675016-185675846 processed_transcript
ENSG00000136527 (TRA2B)
transformer 2 beta homolog (Drosophila) 		ENST00000259043 (TRA2B-014) 185917155-185923893 protein_coding
ENST00000342294 (TRA2B-017) 185931754-185938013 protein_coding
ENST00000382191 (TRA2B-008) 185917715-185938103 protein_coding
ENST00000414862 (TRA2B-016) 185917328-185922107 protein_coding
ENST00000453386 (TRA2B-001) 185915906-185938136 protein_coding
ENST00000456380 (TRA2B-003) 185917330-185938029 nonsense_mediated_decay
ENST00000463328 (TRA2B-006) 185916749-185925264 retained_intron
ENST00000465245 (TRA2B-010) 185922043-185937998 processed_transcript
ENST00000466832 (TRA2B-007) 185917329-185923809 retained_intron
ENST00000471134 (TRA2B-012) 185926727-185936600 processed_transcript
ENST00000477939 (TRA2B-013) 185925273-185931618 retained_intron
ENST00000480461 (TRA2B-009) 185931515-185938024 retained_intron
ENST00000485530 (TRA2B-011) 185925085-185937987 retained_intron
ENST00000487615 (TRA2B-004) 185917329-185937420 retained_intron
ENST00000492417 (TRA2B-005) 185916744-185929073 retained_intron
ENST00000493864 (TRA2B-015) 185925230-185926770 retained_intron
ENSG00000163915 (C3orf65)
IGF2BP2 antisense RNA 1 		ENST00000296270 (C3orf65-001) 185713292-185718167 antisense
ENST00000456447 (C3orf65-002) 185713252-185729787 antisense
ENST00000465364 (C3orf65-005) 185728244-185728587 antisense
ENST00000470754 (C3orf65-004) 185712528-185716892 antisense
ENST00000496717 (C3orf65-003) 185722464-185729787 antisense
CIL_0003YC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033581-ENSMUSG00000022858 CGP 10090 16:22059009-22266005
GeneTranscriptPositionBiotype
ENSMUSG00000022858 (Tra2b)
transformer 2 beta homolog (Drosophila) 		ENSMUST00000023564 (Tra2b-006) 22246448-22255247 protein_coding
ENSMUST00000159946 (Tra2b-004) 22254517-22259622 processed_transcript
ENSMUST00000160579 (Tra2b-002) 22258064-22265918 retained_intron
ENSMUST00000161286 (Tra2b-001) 22244549-22266005 protein_coding
ENSMUST00000161774 (Tra2b-005) 22246899-22252649 retained_intron
ENSMUST00000162413 (Tra2b-003) 22246462-22265829 nonsense_mediated_decay
ENSMUSG00000033581 (Igf2bp2)
insulin-like growth factor 2 mRNA binding protein 2 		ENSMUST00000100052 (Igf2bp2-001) 22059009-22163299 protein_coding
ENSMUST00000115379 (Igf2bp2-004) 22059460-22161450 protein_coding
ENSMUST00000124318 (Igf2bp2-007) 22061366-22063697 retained_intron
ENSMUST00000125926 (Igf2bp2-005) 22151464-22162992 processed_transcript
ENSMUST00000127696 (Igf2bp2-002) 22160881-22162975 retained_intron
ENSMUST00000129913 (Igf2bp2-003) 22059055-22163019 retained_intron
ENSMUST00000134188 (Igf2bp2-009) 22059074-22089118 retained_intron
ENSMUST00000146885 (Igf2bp2-006) 22076018-22079118 retained_intron
ENSMUST00000151087 (Igf2bp2-008) 22083942-22137209 processed_transcript
ENSMUSG00000043870 (Gm5809)
predicted pseudogene 5809 		ENSMUST00000121854 (Gm5809-001) 22230391-22230919 processed_pseudogene
ENSMUSG00000098043 (Gm26980)
predicted gene, 26980 		ENSMUST00000183321 (Gm26980-001) 22236921-22237315 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YC_0001ENSDARG00000002168ENSDART00000021266ENSDART00000132331ENSDART00000142024ENSDART00000146059ENSDART00000146127CIL_0003YC_0002ENSG00000073792ENST00000346192ENST00000382199ENST00000421047ENST00000457616ENST00000461957ENST00000464166ENST00000466214ENST00000466476ENST00000493302ENST00000494906ENST00000496495ENSG00000136527ENST00000259043ENST00000342294ENST00000382191ENST00000414862ENST00000453386ENST00000456380ENST00000463328ENST00000465245ENST00000466832ENST00000471134ENST00000477939ENST00000480461ENST00000485530ENST00000487615ENST00000492417ENST00000493864ENSG00000163915ENST00000296270ENST00000456447ENST00000465364ENST00000470754ENST00000496717CIL_0003YC_0003ENSMUSG00000022858ENSMUST00000023564ENSMUST00000159946ENSMUST00000160579ENSMUST00000161286ENSMUST00000161774ENSMUST00000162413ENSMUSG00000033581ENSMUST00000100052ENSMUST00000115379ENSMUST00000124318ENSMUST00000125926ENSMUST00000127696ENSMUST00000129913ENSMUST00000134188ENSMUST00000146885ENSMUST00000151087ENSMUSG00000043870ENSMUST00000121854ENSMUSG00000098043ENSMUST00000183321
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YC_0001ENSDARG00000002168ENSDART00000021266ENSDART00000142024CIL_0003YC_0002ENSG00000073792ENST00000346192ENST00000382199ENST00000421047ENST00000457616ENST00000494906ENST00000496495ENSG00000136527ENST00000259043ENST00000382191ENST00000453386ENST00000456380ENST00000466832ENST00000480461ENST00000485530ENST00000487615ENST00000492417ENSG00000163915ENST00000296270ENST00000456447ENST00000470754ENST00000496717CIL_0003YC_0003ENSMUSG00000022858ENSMUST00000023564ENSMUST00000160579ENSMUST00000161286ENSMUST00000161774ENSMUST00000162413ENSMUSG00000033581ENSMUST00000100052ENSMUST00000115379ENSMUST00000127696ENSMUST00000129913ENSMUST00000134188ENSMUSG00000043870ENSMUST00000121854ENSMUSG00000098043ENSMUST00000183321
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002168 ENSDART00000021266 N/A N/A N/A 18.222±6.90 N/A N/A 14.706±9.94 5.069±0.00 1.110±0.00 N/A 3.048±0.00 N/A N/A N/A
ENSDART00000132331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142024 N/A N/A N/A N/A N/A N/A 1.570±0.00 2.602±0.50 N/A N/A N/A N/A N/A N/A
ENSDART00000146059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073792 ENST00000346192 2.086±0.00 N/A 1.483±0.00 N/A N/A 0.585±0.00 0.937±0.66 0.151±0.00 0.208±0.00 N/A N/A 4.875±3.85 2.288±0.19 1.885±0.00
ENST00000382199 2.515±0.00 0.358±0.00 N/A N/A 0.928±0.00 1.537±0.38 3.266±0.00 1.072±0.82 0.205±0.00 3.604±1.62 N/A 27.017±28.08 5.311±0.72 0.707±0.00
ENST00000421047 N/A N/A N/A N/A 1.641±0.00 2.270±0.00 0.430±0.00 N/A 0.218±0.00 N/A 0.091±0.00 40.372±25.29 9.144±0.00 3.690±0.00
ENST00000457616 0.796±0.00 0.369±0.00 N/A 0.043±0.00 0.812±0.00 N/A N/A N/A 0.094±0.00 N/A N/A 100.874±0.00 7.456±0.00 4.020±0.00
ENST00000461957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.172±0.00
ENST00000496495 N/A N/A N/A 0.757±0.00 N/A N/A N/A 1.531±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000136527 ENST00000259043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.668±0.00 31.716±0.00
ENST00000342294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382191 N/A N/A N/A 13.716±7.77 N/A 12.892±0.00 9.231±0.00 34.959±0.00 N/A 37.661±0.00 10.195±2.49 106.312±0.00 33.398±0.00 24.799±0.00
ENST00000414862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453386 N/A N/A N/A 1.548±0.00 N/A N/A N/A N/A N/A N/A N/A 5.456±0.00 6.277±0.00 N/A
ENST00000456380 12.484±0.00 N/A N/A 1.412±0.00 9.794±2.91 8.034±1.08 N/A 5.502±0.00 N/A N/A 4.760±0.33 44.689±28.72 21.729±0.00 18.714±0.00
ENST00000463328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466832 N/A N/A N/A 1.432±0.00 N/A N/A N/A N/A 2.424±0.00 N/A N/A 13.570±0.00 N/A N/A
ENST00000471134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.336±0.00 N/A
ENST00000485530 N/A N/A 9.991±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487615 N/A N/A 2.863±0.00 1.022±0.00 N/A N/A 1.398±0.00 N/A 3.145±0.00 N/A N/A N/A N/A N/A
ENST00000492417 N/A N/A N/A 1.552±0.00 N/A 4.026±0.00 1.097±0.00 3.475±0.00 2.176±0.00 N/A 1.295±0.00 5.032±0.00 N/A N/A
ENST00000493864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163915 ENST00000296270 0.022±0.00 N/A N/A N/A N/A 0.078±0.00 0.014±0.00 0.095±0.00 0.178±0.00 N/A N/A 0.028±0.01 N/A 0.516±0.00
ENST00000456447 N/A 0.016±0.00 N/A 0.037±0.00 0.009±0.00 0.073±0.00 0.014±0.00 N/A 0.039±0.00 0.023±0.00 N/A N/A 0.030±0.00 0.048±0.00
ENST00000465364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470754 N/A N/A N/A N/A 0.055±0.00 N/A 0.228±0.00 N/A N/A 0.326±0.00 N/A N/A 0.025±0.00 N/A
ENST00000496717 N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022858 ENSMUST00000023564 10.236±1.69 7.716±1.14 N/A N/A 11.963±2.16 N/A 4.992±0.66 5.500±2.52 16.367±16.20 5.700±1.18 3.098±0.00 25.264±2.68 23.918±13.24 11.637±3.84
ENSMUST00000159946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160579 N/A N/A N/A N/A N/A N/A N/A N/A 6.000±0.00 N/A N/A N/A N/A N/A
ENSMUST00000161286 12.902±6.15 8.059±5.01 4.530±0.56 6.021±2.27 10.989±6.12 14.489±2.84 3.439±0.93 8.350±0.95 10.337±9.24 11.329±3.14 1.446±0.28 21.091±7.97 10.788±5.86 7.844±2.86
ENSMUST00000161774 N/A N/A N/A 13.147±0.00 N/A N/A N/A N/A N/A N/A N/A 49.315±0.00 41.840±7.97 19.611±0.00
ENSMUST00000162413 N/A N/A N/A 8.253±0.00 N/A N/A N/A N/A N/A N/A N/A 18.164±0.00 15.559±5.94 21.114±0.00
ENSMUSG00000033581 ENSMUST00000100052 1.141±0.74 0.584±0.14 0.530±0.09 1.696±0.20 0.392±0.15 3.745±0.84 0.282±0.10 0.702±0.29 0.896±0.37 1.307±0.13 0.216±0.01 1.026±0.40 6.203±2.09 0.132±0.08
ENSMUST00000115379 0.616±0.46 1.270±0.00 0.238±0.00 1.669±0.65 0.253±0.09 1.577±0.55 0.417±0.15 0.544±0.11 0.679±0.63 0.754±0.25 0.502±0.00 1.360±0.69 16.203±14.04 0.082±0.04
ENSMUST00000124318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127696 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A
ENSMUST00000129913 0.051±0.00 0.152±0.00 0.135±0.03 0.927±0.17 N/A 0.559±0.00 0.102±0.01 0.133±0.00 0.081±0.00 N/A 0.059±0.00 0.367±0.11 N/A 0.028±0.00
ENSMUST00000134188 N/A 0.802±0.36 0.391±0.17 0.780±0.63 0.086±0.00 2.673±0.00 N/A 0.308±0.00 0.910±0.74 0.665±0.17 0.197±0.09 1.612±0.67 14.086±7.79 0.222±0.10
ENSMUST00000146885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043870 ENSMUST00000121854 0.625±0.11 0.246±0.10 0.117±0.03 0.137±0.07 0.118±0.06 0.366±0.24 0.182±0.12 0.315±0.24 0.570±0.33 0.200±0.03 N/A 1.044±0.72 0.593±0.21 3.472±2.88
ENSMUSG00000098043 ENSMUST00000183321 0.141±0.00 N/A 0.035±0.00 0.101±0.04 0.506±0.15 0.467±0.00 N/A 0.139±0.01 0.168±0.10 0.308±0.00 N/A 0.399±0.16 0.198±0.09 0.380±0.00

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