C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: insulin-like growth factor 2 mRNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000073792 IGF2BP2 9606 - 3:185643739-185825056 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346192 IGF2BP2-002 185643975-185825024 protein_coding
  ENST00000382199 IGF2BP2-001 185643739-185825056 protein_coding
  ENST00000421047 IGF2BP2-201 185645501-185821131 protein_coding
  ENST00000457616 IGF2BP2-008 185643975-185825012 protein_coding
  ENST00000461957 IGF2BP2-005 185689455-185823271 processed_transcript
  ENST00000464166 IGF2BP2-003 185646880-185649523 processed_transcript
  ENST00000466214 IGF2BP2-009 185814055-185821103 processed_transcript
  ENST00000466476 IGF2BP2-006 185696415-185824892 processed_transcript
  ENST00000493302 IGF2BP2-007 185689555-185821131 processed_transcript
  ENST00000494906 IGF2BP2-010 185649403-185689238 processed_transcript
  ENST00000496495 IGF2BP2-004 185675016-185675846 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346192ENST00000382199ENST00000421047ENST00000457616ENST00000494906ENST00000496495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346192 2.086±0.00 N/A 1.483±0.00 N/A N/A 0.585±0.00 0.937±0.66 0.151±0.00 0.208±0.00 N/A N/A 4.875±3.85 2.288±0.19 1.885±0.00
ENST00000382199 2.515±0.00 0.358±0.00 N/A N/A 0.928±0.00 1.537±0.38 3.266±0.00 1.072±0.82 0.205±0.00 3.604±1.62 N/A 27.017±28.08 5.311±0.72 0.707±0.00
ENST00000421047 N/A N/A N/A N/A 1.641±0.00 2.270±0.00 0.430±0.00 N/A 0.218±0.00 N/A 0.091±0.00 40.372±25.29 9.144±0.00 3.690±0.00
ENST00000457616 0.796±0.00 0.369±0.00 N/A 0.043±0.00 0.812±0.00 N/A N/A N/A 0.094±0.00 N/A N/A 100.874±0.00 7.456±0.00 4.020±0.00
ENST00000494906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.172±0.00
ENST00000496495 N/A N/A N/A 0.757±0.00 N/A N/A N/A 1.531±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0001 VISTA 3:185444884-186046681
CIL_0006RH CIL_0006RH_0001 CGP 3:185582496-185825056
CIL_0003YC CIL_0003YC_0002 CGP 3:185643739-185938136

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003729 IEA mRNA binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IDA cytoskeleton
GO:0009653 TAS anatomical structure morphogenesis
GO:0010467 TAS gene expression
GO:0017148 ISS negative regulation of translation
GO:0042035 IC regulation of cytokine biosynthetic process
GO:0044822 IDA poly(A) RNA binding
GO:0045182 ISS translation regulator activity
GO:0048027 IDA mRNA 5'-UTR binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003421 igf2bp2a insulin-like growth factor 2 mRNA binding protein 2a protein_coding Danio_rerio
ENSDARG00000061661 igf2bp2b insulin-like growth factor 2 mRNA binding protein 2b protein_coding Danio_rerio
ENSMUSG00000033581 Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 protein_coding Mus_musculus

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