C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: insulin-like growth factor 2 mRNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115379 Igf2bp2-004 ENSMUSG00000033581 10090 - 16:22059460-22161450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115379
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115379 0.616±0.46 1.270±0.00 0.238±0.00 1.669±0.65 0.253±0.09 1.577±0.55 0.417±0.15 0.544±0.11 0.679±0.63 0.754±0.25 0.502±0.00 1.360±0.69 16.203±14.04 0.082±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0006RH CIL_0006RH_0002 CGP 16:22009484-22163299
CIL_0003YC CIL_0003YC_0003 CGP 16:22059009-22266005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346192 IGF2BP2-002 protein_coding Homo_sapiens 0 1705
ENST00000382199 IGF2BP2-001 protein_coding Homo_sapiens 0 2937
ENST00000421047 IGF2BP2-201 protein_coding Homo_sapiens 0 1934
ENST00000435000 RP11-325P15.1-001 processed_pseudogene Homo_sapiens 0 826
ENST00000440915 AP004290.1-001 processed_pseudogene Homo_sapiens 0 863
ENST00000457616 IGF2BP2-008 protein_coding Homo_sapiens 0 2854
ENST00000461957 IGF2BP2-005 processed_transcript Homo_sapiens 0 305
ENST00000464166 IGF2BP2-003 processed_transcript Homo_sapiens 0 307
ENST00000466476 IGF2BP2-006 processed_transcript Homo_sapiens 0 241
ENST00000493302 IGF2BP2-007 processed_transcript Homo_sapiens 0 303
ENST00000494906 IGF2BP2-010 processed_transcript Homo_sapiens 0 460
ENST00000550858 RP11-76E16.2-001 processed_pseudogene Homo_sapiens 0 905

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