C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, AMPA2 (alpha 2)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033981 Gria2 10090 - 3:80684936-80802791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075316 Gria2-201 80684936-80802791 protein_coding
  ENSMUST00000107745 Gria2-202 80684936-80802791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075316ENSMUST00000107745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075316 0.046±0.04 0.473±0.25 0.004±0.00 12.532±4.35 0.022±0.01 0.025±0.01 0.004±0.00 0.025±0.00 0.016±0.01 0.035±0.01 0.002±0.00 0.059±0.03 0.008±0.01 0.009±0.00
ENSMUST00000107745 0.056±0.06 0.763±0.33 0.004±0.00 15.578±9.30 0.023±0.01 0.054±0.06 0.004±0.00 0.033±0.03 0.009±0.01 0.035±0.01 0.002±0.00 0.142±0.14 0.007±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007F1 CIL_0007F1_0002 CGP 3:80684936-80913660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004970 IDA ionotropic glutamate receptor activity
GO:0004971 IBA alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
GO:0005234 IDA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0007268 IDA synaptic transmission
GO:0008021 IDA synaptic vesicle
GO:0016020 IDA membrane
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0045202 IDA synapse
GO:0045211 IBA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052765 gria2b glutamate receptor, ionotropic, AMPA 2b protein_coding Danio_rerio
ENSDARG00000070173 gria2a glutamate receptor, ionotropic, AMPA 2a protein_coding Danio_rerio
ENSG00000120251 GRIA2 glutamate receptor, ionotropic, AMPA 2 protein_coding Homo_sapiens

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