C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, AMPA 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052765 gria2b 7955 + 14:36968744-37033972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000064617 gria2b-001 36968744-37033972 protein_coding
  ENSDART00000074671 gria2b-002 36968780-37032629 protein_coding
  ENSDART00000134602 gria2b-003 37026699-37030817 processed_transcript
  ENSDART00000147856 gria2b-004 37030364-37032576 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000064617ENSDART00000074671ENSDART00000147856
Transcript ID Brain Kidney Liver Muscle
ENSDART00000064617 81.075±17.48 0.033±0.00 0.036±0.00 2.453±0.00
ENSDART00000074671 37.908±11.10 0.161±0.12 N/A 1.519±0.00
ENSDART00000147856 N/A N/A 0.096±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DX CIL_0006DX_0001 CGP 14:36912246-37033972
CIL_00007X CIL_00007X_0001 CGP 14:36968744-37103245

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005216 IEA ion channel activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000120251 GRIA2 glutamate receptor, ionotropic, AMPA 2 protein_coding Homo_sapiens
ENSMUSG00000033981 Gria2 glutamate receptor, ionotropic, AMPA2 (alpha 2) protein_coding Mus_musculus

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