C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034269 Setd5 10090 + 6:113077365-113153435 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042889 Setd5-001 113077365-113153435 protein_coding
  ENSMUST00000113155 Setd5-002 113105037-113153435 protein_coding
  ENSMUST00000113157 Setd5-201 113077639-113153424 protein_coding
  ENSMUST00000124467 Setd5-007 113108873-113117931 retained_intron
  ENSMUST00000125003 Setd5-012 113077602-113117617 processed_transcript
  ENSMUST00000136128 Setd5-004 113077561-113106319 processed_transcript
  ENSMUST00000138327 Setd5-009 113110417-113117586 retained_intron
  ENSMUST00000141072 Setd5-005 113077578-113138903 retained_intron
  ENSMUST00000142215 Setd5-006 113105084-113151835 processed_transcript
  ENSMUST00000143998 Setd5-003 113077365-113107561 retained_intron
  ENSMUST00000149584 Setd5-008 113109865-113151835 retained_intron
  ENSMUST00000150107 Setd5-010 113127749-113151856 retained_intron
  ENSMUST00000153513 Setd5-011 113104935-113138275 processed_transcript
  ENSMUST00000156048 Setd5-013 113128681-113138511 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042889ENSMUST00000113155ENSMUST00000113157ENSMUST00000125003ENSMUST00000142215ENSMUST00000149584ENSMUST00000150107ENSMUST00000153513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042889 5.630±0.96 3.931±0.41 7.737±0.56 8.114±2.98 3.313±1.41 3.466±0.77 1.939±0.51 2.055±0.25 2.939±1.75 5.335±1.70 1.782±0.58 4.057±1.48 8.004±1.39 2.811±0.49
ENSMUST00000113155 N/A 4.792±1.08 7.899±0.26 11.570±4.10 2.655±0.00 N/A 1.347±0.00 2.055±0.89 4.292±1.57 N/A 1.514±0.39 18.365±9.72 8.849±0.48 3.241±0.00
ENSMUST00000113157 3.718±1.47 4.143±0.87 N/A N/A 3.469±0.50 5.510±0.87 1.733±0.07 1.842±0.55 1.530±0.27 5.045±1.46 1.775±0.73 4.258±1.70 23.659±0.82 2.811±1.16
ENSMUST00000125003 N/A N/A N/A N/A N/A 26.043±6.79 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142215 N/A N/A N/A N/A 3.594±0.00 N/A 1.381±0.00 N/A N/A N/A N/A N/A N/A 1.661±0.00
ENSMUST00000149584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.250±0.00 N/A N/A
ENSMUST00000150107 6.335±1.04 6.777±0.89 N/A N/A 6.452±1.49 10.149±2.57 N/A 4.319±1.06 N/A 3.753±0.00 N/A 7.277±2.75 N/A N/A
ENSMUST00000153513 N/A N/A N/A 5.792±0.00 N/A N/A N/A N/A N/A N/A N/A 12.760±0.00 12.974±1.33 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0002 CGP 6:113046225-113153435
CIL_0002W7 CIL_0002W7_0002 CGP 6:113077365-113195384

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078576 setd5 SET domain containing 5 protein_coding Danio_rerio
ENSG00000168137 SETD5 SET domain containing 5 protein_coding Homo_sapiens

Loading