C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125003 Setd5-012 ENSMUSG00000034269 10090 + 6:113077602-113117617 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000125003
Transcript ID Colon
ENSMUST00000125003 26.043±6.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0002 CGP 6:113046225-113153435
CIL_0002W7 CIL_0002W7_0002 CGP 6:113077365-113195384

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302463 SETD5-003 protein_coding Homo_sapiens 0 309
ENST00000399686 SETD5-015 protein_coding Homo_sapiens 0 309
ENST00000402198 SETD5-201 protein_coding Homo_sapiens 0 309
ENST00000406341 SETD5-001 protein_coding Homo_sapiens 0 394
ENST00000407969 SETD5-004 protein_coding Homo_sapiens 0 309
ENST00000413704 SETD5-016 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000415650 SETD5-021 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000431285 SETD5-007 nonsense_mediated_decay Homo_sapiens 0 475
ENST00000442373 SETD5-023 protein_coding Homo_sapiens 7e-29 132
ENST00000443339 SETD5-002 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000450326 SETD5-020 protein_coding Homo_sapiens 0 285
ENST00000463180 SETD5-019 retained_intron Homo_sapiens 0 287
ENST00000466242 SETD5-006 retained_intron Homo_sapiens 0 309
ENST00000468208 SETD5-022 processed_transcript Homo_sapiens 0 283
ENST00000478475 SETD5-010 processed_transcript Homo_sapiens 0 331
ENST00000490791 SETD5-008 processed_transcript Homo_sapiens 0 268
ENST00000493918 SETD5-005 retained_intron Homo_sapiens 0 309
ENST00000497213 SETD5-024 processed_transcript Homo_sapiens 0 309

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