C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150107 Setd5-010 ENSMUSG00000034269 10090 + 6:113127749-113151856 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryENSMUST00000150107
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary
ENSMUST00000150107 6.335±1.04 6.777±0.89 6.452±1.49 10.149±2.57 4.319±1.06 3.753±0.00 7.277±2.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0002 CGP 6:113046225-113153435
CIL_0002W7 CIL_0002W7_0002 CGP 6:113077365-113195384

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302463 SETD5-003 protein_coding Homo_sapiens 0 3264
ENST00000399686 SETD5-015 protein_coding Homo_sapiens 0 1801
ENST00000402198 SETD5-201 protein_coding Homo_sapiens 0 3264
ENST00000406341 SETD5-001 protein_coding Homo_sapiens 0 3264
ENST00000407969 SETD5-004 protein_coding Homo_sapiens 0 3264
ENST00000413704 SETD5-016 nonsense_mediated_decay Homo_sapiens 0 2837
ENST00000421188 SETD5-013 protein_coding Homo_sapiens 0 726
ENST00000443339 SETD5-002 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000459941 SETD5-014 retained_intron Homo_sapiens 0 488
ENST00000466242 SETD5-006 retained_intron Homo_sapiens 0 3264
ENST00000466826 SETD5-029 retained_intron Homo_sapiens 0 424
ENST00000476740 SETD5-030 processed_transcript Homo_sapiens 0 542
ENST00000478961 SETD5-012 processed_transcript Homo_sapiens 0 542
ENST00000479538 SETD5-028 processed_transcript Homo_sapiens 0 327
ENST00000486465 SETD5-026 retained_intron Homo_sapiens 0 928
ENST00000488236 SETD5-011 processed_transcript Homo_sapiens 0 363
ENST00000492939 SETD5-027 retained_intron Homo_sapiens 0 706
ENST00000493918 SETD5-005 retained_intron Homo_sapiens 0 3264

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